Dipodomys spectabilis (banner-tailed kangaroo rat): 122105889
Help
Entry
122105889 CDS
T07891
Symbol
Mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122105889 (Mkrn1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122105889 (Mkrn1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122105889 (Mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-CCCH_PARP12
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122105889
NCBI-ProteinID:
XP_042533092
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MAEAAAPGTTAATSGAGAAAAAAAPLTPTPTVTAPSPGAGGGGGGGGGGWTKQVTCRYFM
HGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKPLKQEEATATDPSTE
PSLAASSLPSGVGQLTEMDTGKAESGNPNLAAVGGAGSEDWVNAIEFVPGQPYCGRTAPS
CPEAPLQGSGAEVESEKEQAAVESKKQLCPYAAVGECRYGENCVYLHGDACDMCGLQVLH
PMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGVCMEVVYEKANPSERRFGILSNC
NHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAM
SNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGASRRYRAQRRNHFWELIEE
RENSSPFEDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDFYDLDL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctcccggaacaacagccgcaacatcaggagccggagcggcggcg
gcggcggcggcgcccctcaccccgacccccacggtcaccgccccgtccccgggggcgggg
ggaggcggcggcggcggcggcggcggctggactaaacaggtcacctgcaggtattttatg
cacggggtttgtaaggaaggagataactgtcgctactcccacgacctctctgacagtcca
tatggtgtagtgtgcaagtattttcaacgtgggtactgtatttacggagaccgctgcaga
tatgaacacagcaagccattgaaacaggaagaagcgactgctacagatccaagcacagaa
ccatctctagctgcttcaagtctcccttctggagttggacagctcactgaaatggatacc
ggcaaagctgagtcaggaaacccaaaccttgcagctgtgggcggggcaggttccgaggac
tgggtgaatgccatcgagttcgttcctgggcagccatactgcggccggactgccccttcc
tgccctgaagcacccctgcagggctcaggggctgaggtggaatctgagaaggagcaggcg
gcagtggaaagcaagaagcagctgtgcccttatgctgcggtgggagagtgccgctatggg
gagaactgtgtgtatctccatggcgacgcatgtgacatgtgtgggctgcaggtcctgcac
cccatggatgcagcccagaggtcacagcacatcaaatcctgcattgaggcccacgagaag
gacatggagctctcgtttgccgtgcagcgcagtaaggacatggtgtgtggcgtctgtatg
gaagtggtctatgagaaggccaatcccagtgagcgccgttttggcatcctctccaactgc
aaccacacctactgtctcaaatgcattcgcaagtggaggagtgctaagcaatttgagagc
aagatcataaagtcctgccccgaatgccgcatcacatctaactttgtcattccaagtgag
tactgggtggaggagaaagaagaaaagcagaaactcattcagaagtacaaggaggccatg
agcaacaaggcatgtaggtatttcgatgaaggacgcgggagctgcccatttgggggtaat
tgtttctacaagcatgcgtaccccgatggccggagagaagagccgcagagacagaaagtg
ggagcctcgaggcgataccgggcccaacgaaggaaccacttctgggagctcattgaggaa
agagagaacagcagcccctttgaagacgaagaggaggttgtcacctttgagctgggcgag
atgttgcttatgcttctggctgcaggtggagacgatgagttgacagactctgaggatgag
tgggacttgtttcacgatgagctggaagatttttatgacttggacttatag
DBGET
integrated database retrieval system
