Dipodomys spectabilis (banner-tailed kangaroo rat): 122105899
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Entry
122105899 CDS
T07891
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03082
ATP-dependent chromatin remodeling
dsp04714
Thermogenesis
dsp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122105899 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122105899 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122105899 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122105899 (Smarcd3)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122105899 (Smarcd3)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122105899 (Smarcd3)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122105899 (Smarcd3)
PBAF complex
122105899 (Smarcd3)
GBAF(ncBAF) complex
122105899 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
122105899
NCBI-ProteinID:
XP_042533110
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAPSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccaccagggg
gcgcccatgggccccccgggctccccttacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gccccgagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccccgagtcccaa
gcttacatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcggaagctgcggctttat
atctccaatacttttaaccctgcgaagcctgatgctgaagactctgatggcagcattgcc
tcctgggagctgcgggtggaggggaaactcctggatgatgtacgtcctggcccaggtctc
tccaggtgtcctgggcccagcaagcagaagcggaagttctcatccttcttcaagagtctg
gttattgagctggacaaggacctttatggcccagacaaccacctcgttgagtggcaccgg
acccctaccacccaggagacggacgggttccaggtgaagaggcccggcgacctcagtgtg
cgctgcaccctgctcctcatgctggactaccagcctccccagttcaaactggacccccgc
ctggcccggctgctggggttgcacacacagagccgctcggccatcgtccaggccctgtgg
cagtatgtgaagaccaacaggctgcaggactctcacgacaaggaatacatcaatggggac
aagtatttccagcagatttttgattgtccccggctgaagttttctgagatcccccagcgc
ctcacagccctgctgttgccccctgacccgatcgtcatcaaccacgtcatcagtgtggat
ccgtcagatcagaagaagacggcgtgctatgacatcgatgtggaggtggaggagccactg
aaaggacagatgagcagcttcctcctgtccacagctaaccagcaggagatcagtgctctg
gacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagggacttc
atgctaagcttctccagagaccccaagggctatgtccaagacctgctccgctcccagagc
cgggacctcaaggtgatgacagatgtagcgggcaaccctgaagaggaacgccgggccgag
ttctaccaccagccctggtcccaggaagcagtcagccgctacttttactgcaagatccag
cagcgcaggcaggagctggagcagtcgctggtggtgcgcaacacctag
DBGET
integrated database retrieval system
