KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122105944
Entry
122105944         CDS       T07891                                 
Symbol
Nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013  Nucleocytoplasmic transport
dsp05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122105944 (Nup43)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122105944 (Nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122105944 (Nup43)
   03036 Chromosome and associated proteins [BR:dsp03036]
    122105944 (Nup43)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122105944 (Nup43)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122105944 (Nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_MABP1-WDR62_1st EIF3I Beta-prop_SPT8 KNTC1_N
Other DBs
NCBI-GeneID: 122105944
NCBI-ProteinID: XP_042533213
LinkDB
Position
Unknown
AA seq 379 aa
MEDIYAKFVSQKISKTRWRPVPPGSLQTAETFATGSWDNEDNYVSLWSIGDFGNVDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVSQQWTAAHY
HTGPGSPSYSGAPCTGVVCDNPEIVTVGEDGRINLFRLDHKEAVRTIDNADSSTLHAVTF
LRTPEILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTDTPEKSS
LFHQGRTSTFLSHSISNQANVHHSLTSSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLGP
CLVCGTDAEAIYVTRQLFS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggaggatatttacgccaaatttgtgtctcagaaaatcagcaaaacccgctggcgaccg
gtgcctcccgggagcctgcagaccgcggagacgttcgctacaggctcttgggacaatgag
gacaattacgtctccctgtggtctattggagattttggaaacgtggattctgatggaggc
tttgaaggagaccatcaattattgtgtgatatcagacaccatggtgatgtcatggattta
cagttttttgaccaggaaagaattgtagctgcttcatcaacaggatgtgtaaccgttttc
cttcaccatccaaataaccagaccctgtcagtgagccagcagtggacagcagctcactac
cacacaggtcctggcagtccttcctatagtggtgcaccatgcacaggtgttgtatgtgac
aacccagaaattgtcacagttggagaagatggtcgaataaatctcttcagacttgatcac
aaggaagctgtaaggactatagacaatgcagatagcagtacacttcatgctgtaaccttc
cttcgaactcctgagattcttacagtaaattcaattggacagttaaaaatatgggatttc
agacaacaaggaaatgagccctctcagatattatcactgactggtgaccgtgtgccgctt
cactgtgtggacagacatcccaaccagcagcatgtggttgctactggtggccaggatgga
atgttgagtatttgggatgttcgacaaggcactatgcctgtatctctcctaaaggcacat
gaagctgaaatgtgggaagttcactttcacccatccaatccagatcatctgtttacttgt
tctgaagatggatccctctggcactgggatgcctctacagatacacccgaaaagtcctcg
ctctttcaccaaggaagaaccagtacttttctttctcacagcattagtaaccaggcaaat
gttcaccattctcttacaagttcctggctcagcactgatcctgcaaaagaccgtattgag
atcacaagtttactgcccagccggactttgtctgtaaacagtttggatgttttgggtcct
tgtcttgtttgtggaactgatgcagaagcaatttatgtcaccagacaactgttttcctaa

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