Dipodomys spectabilis (banner-tailed kangaroo rat): 122106270
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Entry
122106270 CDS
T07891
Symbol
Ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122106270 (Ppfibp1)
Membrane trafficking [BR:
dsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122106270 (Ppfibp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
Nuf2_DHR10-like
DUF3450
Motif
Other DBs
NCBI-GeneID:
122106270
NCBI-ProteinID:
XP_042533517
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGLFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMESDEKEGLRCQVPDSTAEALVEWLQSQMTNGHLPRNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRLDYEDRFRDTEELMQEITDLRLKVSEMDTERLQYEKKLKSTKEELASLKE
QLEEKESEVQRLQEKLMCQLKGEGIEIIDRDENFKQKFKEKNVEVQKLKKAMESLMAANE
EKDRKIEDLRQCLNKYKKMQDTVALVQGQKGKDGEYEDLLLNSSSISTLMNTQGFGDLEK
SPSSTPGTGSPIHEPFNTSTSEELQTSILQVSVPSLLPANVDVETAEYSKSPPKQETSLQ
EKDGKTVLGAAVDSLSTSSLQKSSSLGNLKKEISDGEKESTQKPSEEKAPGEGRTCGTLP
PKIPRHVPSVDDNPFGTRKARSSFGRGFFKIKSNKRTASAPNLDRERSASAPTLAETEKE
AAEHLDLAGVSSRPRASQGTSPFQLSPPSPDSRKKSRGIMRLFGKLKRSQSTTFNPDDLS
EPEFKRGGTRATAGPRLGWSRDLGQSNSNLDMPFAKWTKEQVCNWLVEQGLGSYLNSGKH
WITSGQTLLQASPQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDD
IGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLR
RRPSDENSISPPEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMA
QLLNIPPNKTLLRRHLATHFNLLIGSEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNF
GNLRKKKQEDGEEYVCPMDLGQASGNASNQACNTDLDLHLYDEDDLDRLEQMEDSEGTVR
QIGVFSEGINNLTYMLKEDDMFKDFAACSPSASITDEDSNV
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgatatgttggctgcagcgttggagcagatggatggtattata
gcaggttctaaggccctggaatattccaatgggctttttgattgccagtctcccacgtct
ccattcatgggaagtttgcgagccctgcacctagtggaggatctgcgaggactgttagag
atgatggaatcagatgagaaggaaggcttgcgatgccaggtcccagattccacagcagaa
gccctggttgaatggctgcagagtcagatgacaaatggacatctacctaggaatggtgat
gtgtatcaagaaagactagctcgcttagaaaatgacaaagaatcccttgttcttcaggtc
agtgtgctgaccgaccaggtggaggcccagggagagaagattcgagacctggagttttgt
cttgaagaacaccgagagaagttgaatgccactgaagaaatgctgcagcaggagcttctt
agtcggacatccttagagactcagaagttggatcttatggctgaaatatctaacttgaag
ttaaaactgacagcagtggagaaggacagactggattatgaagacaggttcagagacaca
gaagagctcatgcaagagatcactgatttgaggctcaaagtcagtgaaatggatactgaa
cgacttcaatatgagaaaaagcttaagtcaaccaaagaagaactggcatctttaaaagag
caactggaagaaaaagaatctgaagtacaaagactacaagaaaaattgatgtgccagctc
aaaggagaaggaattgaaattattgacagagatgaaaattttaaacagaagttcaaagaa
aaaaatgttgaagtacaaaaactgaaaaaggccatggagtctctgatggcagcaaatgaa
gaaaaggatagaaaaatagaagatctcagacaatgcctaaacaagtacaagaaaatgcaa
gacacagtagcactggtccaaggccaaaaaggtaaagatggtgaatatgaagacctgctg
ctcaattctagctccatctccaccttgatgaacacccagggctttggtgatctggagaag
agtccttcatccactccaggaacaggatctcccattcatgagccattcaacacaagcact
tcagaagagctccaaaccagcatattgcaagtttcagttccttcattattgccagcaaat
gtggatgtggaaactgctgaatattcgaagtcacctcccaaacaagaaacttcattgcaa
gagaaggatggaaaaacagtccttggtgctgctgttgatagcctctcgacttcaagtctg
caaaagtccagcagcctggggaacttgaaaaaagagatctcagatggggaaaaggagtct
actcagaagccttcagaggagaaagccccaggagaaggccgcacatgtgggaccctccct
cccaagattcccagacatgttccttctgtggatgacaacccctttggcactcgaaaagcg
agatcttcttttggccggggctttttcaaaatcaaaagcaacaagaggacggcaagtgct
cccaacctggatcgtgaacgaagtgccagtgcacccaccttagctgaaacagaaaaggaa
gcagcagagcacttagatttggctggtgtgtcttctcggcccagagcttcacaggggacc
agccccttccagctatctccaccttctccagactccagaaagaaatcccgagggatcatg
agactttttggaaaacttaagagaagccaatcaaccaccttcaatccagatgacttgtcc
gagcctgagttcaaaagaggagggacccgggcgactgcgggcccccgactcgggtggtct
cgagatttgggacagtccaacagtaacttggatatgccatttgccaagtggaccaaggag
caagtttgtaattggctggtagaacaaggcctggggtcttacctgaattctggcaagcac
tggatcacctctggccaaacccttctgcaggcttccccacaggatctggagaaggaactt
ggaattaagcattcacttcataggaagaaactgcagctggctttgcaggccctaggatcc
gaagaagaaacgaaccatggaaagttggatttcaactgggtcactagatggcttgatgat
attggcctcccccagtacaagactcagtttgatgaaggacgtgtggatggccgaatgcta
cactacatgactgttgatgacttgctgtctttgaaggttgtgagtgtcctgcaccatctc
agtatcaagagggccatccaggtcctaaggatcaataactttgagccaaactgtctccgg
aggcggccgtctgatgagaatagcatctcccctcccgaagtgcagcagtggactaatcac
cgggtgatggaatggctgcgctctgtggacttggcagaatacgcccctaacctcaggggt
agcggtgtccatggtggtcttatggttctcgaacctcgctttaatgtggaaaccatggct
cagttactgaacatcccccctaataagaccttgttgagaagacatttagccactcatttc
aacctcctgattggctctgaggcccagcaccagaagcgagacgccatggagttaccagat
tatgtacttttgactgccactgccaaagtgaagccaaagaaactgaccttcagcaatttt
ggcaatctgagaaagaaaaagcaggaagatggagaagaatatgtttgtccaatggacctg
ggacaagcatcaggcaatgcctctaaccaggcctgtaatactgacctggacctacacttg
tatgatgaggatgatttggaccggctagagcagatggaagattctgaagggacagtaaga
cagatcggtgtattctctgaaggcatcaacaatctcacatatatgctgaaagaagacgac
atgtttaaggacttcgctgcctgctccccaagtgccagcattactgatgaagactccaat
gtctga
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