Dipodomys spectabilis (banner-tailed kangaroo rat): 122106463
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Entry
122106463 CDS
T07891
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122106463 (Pnn)
03015 mRNA surveillance pathway
122106463 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122106463 (Pnn)
03041 Spliceosome [BR:
dsp03041
]
122106463 (Pnn)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122106463 (Pnn)
Spliceosome [BR:
dsp03041
]
Complex C
Other components
EJC/TREX
122106463 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
122106463
NCBI-ProteinID:
XP_042533743
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRLEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIGHSDAEKEQEEEEQKQ
EMEVKMEEETETRESEKQQDSQPEEVMDVLEMVESVQNVIAEQEVVETNQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPPKENVSVVEVEKGSEEKEEKESEPQPEPVAQPQSLL
PPQPQSQPQQVHQPQPLSQPETLTLAISQAPPQVIQEQENQLPERKEFPVEPVKLTEVPV
VEPVLTVHSESKSKTKTRSRSRGRVRNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSS
SSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLE
RSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagaaagcctaaag
aacgtagatgagaacatccgcaagctcaccgggcgagatccgaatgacgtgagacccatc
caagcccgattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcgcgccaagagagt
gacccagaggatgatgatgttaagaagccggcactgcagtcttcagttgtagctacctcc
aaagaacgcacacgcagagaccttatccaggatcaaaatatggatgaaaagggaaagcag
aggaatcgacgaatatttggcttgttgatgggtactcttcagaaatttaaacaagaatct
actgttgctactgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaagttgaaaatgaaaggagagaactatttgaagagagacgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcctcgaatttgcagaacaaataaataag
atggaggctaggcctagaagacagacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaagaggaagaaaag
gaagtaggtatagggcatagtgatgcagagaaagaacaggaggaggaggagcaaaaacag
gaaatggaggttaagatggaggaggaaacagagacaagggaaagtgagaaacaacaggat
agtcagcctgaggaagttatggatgtgctagagatggttgagagtgtccagaatgtaatt
gctgagcaggaagtggtggaaactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctccaaaagagaatgttagtgttgtagaagtggaaaaaggatcagaggaa
aaagaagaaaaagaatctgaaccccaacctgagcctgtggctcagcctcagtccctcctt
ccaccccagcctcagtctcagccccagcaagtacatcagccccagcctctctctcagcct
gagacattgacattagctatttcacaggcaccaccgcaggttattcaggaacaagagaat
caactacctgagaggaaagagtttcctgttgagcctgtaaagctcactgaggtgccagta
gtggaaccagttttaacagtgcactcagaaagcaaaagtaaaaccaaaaccaggagtaga
agtagaggtcgagttagaaataaaacaagcaagagtagaagtcggagcagtagcagcagt
agttctagtagcagttcaaccagtagcagcagcggaagcagttctagcagtggcagcagt
agtagtcgaagcagttctagtagtagttccagtacaagtggtagtagtagcagagatagt
agcagcagcactactagtagcagtgagagtagaagtcgaagtaggggtcggggacacaat
agagacagaaagcacagaaggagcatggatcggaagcgaagggatacatcaggattagaa
agaagtcacaaatcttcaaaaggtggtagtagtagagatacaaaaggatcgaaggataag
aattcccggtctgacagaaagaggtctatatcagagagtagtcgatcgggcaaacgatct
tcaagaagtgagagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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