Dipodomys spectabilis (banner-tailed kangaroo rat): 122106513
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Entry
122106513 CDS
T07891
Symbol
Npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122106513 (Npas3)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122106513 (Npas3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
122106513
NCBI-ProteinID:
XP_042533809
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAGANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIE
VFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHV
EMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTSLLTTDNTLERSFFIR
MKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEV
RIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLL
NKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIA
QLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA
CDNDMNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAAEDGFGGLGPMQIKVERYVESESD
LRLQNCESLTSDSAKDSDSAGEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGAA
AGLVEPPRLLSSPHSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPS
SEHFPSPPGGGGGGGGGGGGGAGLHVAIPDSVLTPPGADSGGAATRKTQFSTSGSTALAP
VVAAAASDPLSPPLSASPRDKHPPGGGGSGGGGSNGGGGPGASNSLLYTGDLEALQRLQA
GNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNAHAVNFVDVNS
PGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPAGNVFTTAEGLFSTLPFPVY
SNGIHAAQTLERKED
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggcg
gccgcgggggtgccggccggtgcgggcatggggagggccggcgccggggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagcattgagaaaggagaaatctcgagatgctgctcgctcccggcgg
ggaaaagaaaattttgagttctacgaattggccaagttgttgccgcttcctgcagccatt
accagccagcttgataaagcatccatcatccgacttacaattagctatctgaaaatgagg
gactttgctaaccaaggagaccctccgtggaacttgcgcatggaaggccctccacctaac
acctcagtaaaagttataggtgcacaacgaagaaggagtcccagcgcgctagccattgaa
gtatttgaagcacatttgggaagtcacattttgcagtccctggatggctttgtatttgca
ctaaatcaagaaggaaaatttttgtacatttctgaaacagtatccatctacctgggcctc
tcacaagtggagctgacaggcagcagcgtctttgactatgtccacccgggagaccacgtg
gagatggcagagcagctgggcatgaagctcccacctgggcgtggtctcctgtcgcagggc
accgctgaggatggagccagctcagcatcttcctcttctcagtccgagacccctgagcca
gtggagtcaaccagtttgttaactaccgacaacaccctggagcgctccttcttcattcga
atgaaatctacactgaccaaacgcggtgtgcatatcaaatcttcaggatataaggtgatt
cacataacaggccggctacgcctgagagtgtcgctgtcccatggaaggactgtccccagc
caaatcatgggtcttgtggttgtggctcatgccttgccacctcctacaatcaacgaagtc
agaattgactgccacatgtttgtcactcgcgtgaatatggacctcaatatcatttactgt
gaaaataggattagtgattacatggatctgacccctgtagacatcgtagggaaaagatgc
tatcacttcatccatgctgaagatgtcgagggcatcaggcacagtcacctggacttgctg
aataaaggtcagtgtgtgacgaagtactatcgctggatgcagaagaatggaggatatatc
tggatacagtctagtgctaccatagctattaatgccaagaatgcaaatgaaaagaacatc
atctgggtgaattatcttcttagcaaccctgagtacaaggacacacctatggacatcgca
cagctcccccacctgccagagaaaacttccgaatcctccgagacatctgactctgaatct
gactctaaagacacctcaggtattacagaggacaatgagaactccaagtctgacgagaag
gggaatcaatctgaaaacagcgaagatcctgagcccgaccggaagaagtcgggcaatgcg
tgtgacaacgacatgaactgcaatgacgacggccacagctccagcaaccccgacagccgc
gacagcgacgacagcttcgaacactcggactttgagaaccccaaggcggccgaggacggc
ttcggggggctgggccccatgcagatcaaggtggagcgttacgtggagagcgagtcggac
ctgcggctgcagaactgcgagtcgctcacgtcagacagcgccaaggactcggacagcgcg
ggcgaggcgggcgcgcaggcctccagcaagcaccagaagcgcaagaagaggcggaaacgc
cagaagggcggcagcgccagccgcaggcgcctctccagcgcgtcgagtcctggcgcagca
gccgggcttgtggagcccccgcggctgctgtcttcccctcacagtgcctctgtgctcaag
atcaagacggagatctcggaacccatcaacttcgacaacgacagcagcatctggaactac
ccgcccaaccgggagatctcccggaatgagtctccctacagcatgaccaagccccccagc
tccgagcacttcccgtccccgcccggtggcggcggcggcggcggcggcggcggcggcggc
ggcgcgggcctgcacgtggccatcccggactcggtcctcaccccgccgggcgccgacagc
ggcggcgcggccacccgcaagactcaattcagcacctcaggcagcacagccctggccccg
gtggtggccgcggcggcctcagacccgctgtcgcccccgctctcggcgtccccgcgggac
aagcacccccccgggggcggcggcagcggaggcggcggcagcaatggcggcggcggcccc
ggggcgtctaactccttgctgtacactggggacctggaggctctgcagaggctacaggcc
ggcaacgtcgtgctccccctggtgcaccgggtgaccgggaccctggcggccaccagcaca
gcggcgcagagggtctacaccacgggcaccatccgctacgcgcccgccgaggtgaccctg
gccatgcagggcaacctgctgcccaacgcacacgccgtcaacttcgtggacgtcaacagc
cccggcttcggcctcgaccccaagacgcccatggagatgctttaccaccacgtgcaccgg
ctcaacatgtcgggaccgttcggcggggcggtgagcgccgccagcctgacgcagatgccc
gccggcaacgtgttcaccacggccgagggactcttctccacgctgcccttcccggtctac
agcaatggcatccacgccgcacagactctggagcgcaaggaggactga
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