Dipodomys spectabilis (banner-tailed kangaroo rat): 122106552
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Entry
122106552 CDS
T07891
Symbol
Fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122106552 (Fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122106552 (Fancm)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
122106552 (Fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCM-MHF_bd
Helicase_C
DEAD
ResIII
ERCC4
Cas3-like_C_2
HHH_2
RcsD_ABL
Spt5_N
Motif
Other DBs
NCBI-GeneID:
122106552
NCBI-ProteinID:
XP_042533879
LinkDB
All DBs
Position
Unknown
AA seq
2028 aa
AA seq
DB search
MNGRQRTLFQTWGPSLARPARAPGCSLRRELPPDPGGSPARASAAAPPQAQPAAEEAQPD
SDDDVLLVAVLEAEQQLRVENGGFCTSSGSLWIYPTNCPVRDYQLHISRTALFCNTLVCL
PTGLGKTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACFQVMGIPQSHMAELTGS
TQALTRKEIWYSKRVLFLTPQVMVNDLTRGACPAADIKCLVVDEAHKALGNYAYCQVVRE
LLKYTSHFRILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILPYSHERRVEKLVV
PLGEELAAIQKTYIQILETFASSLIQRNLLMRSDIPNLTKYQIILARDQFRKNPSPNIVG
IHQGIIEGEFAICISLYHGYELLQQMGMRSLYSFLCGIMDGTKGMARAKTELSRNEDFMK
LYSHLECIFAHTPGTSASDNARIHKGDRSKDFFYSHPKLKKLEEVVIEHFRSWNAKNTSE
KKNDETRVMIFSSFRDSVQEIAEMLLKHQPVIRVMTFVGHATGKSMKGFTQKEQLEVVRR
FRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQRMGRTGRKRQGRIVVILAE
GREERTYNQSQSNKRNIYKAISGSRQILHYYQGSPRMVPDDINPKLHKMFITHGVFESEK
ASRSVRRKSSRERMRQNQSRKDCFLTEEEFKLWNRLYRLKDSDEIKEITLPQVHFPSLQD
EENISTQTPTTGVHQLSLSEWRVWQDHLLPTYQVDHSDRCQHYVSIMQMIEGMRHEEGEC
SYELEIKSYLQMEDVSTTFSIPRNEYLNLANDTITTHKKSLLAQNIHQGSLFSMEFDEDH
DEIFKQTHTKTTDSGSLKKPSCKEMKKDEHKGEKNDVHFLHSDTNFTVQNVSQVDLTNGK
RISGSHNIAETCTVNQLGVSSVECQFINKSTISFMGSLLDSGFNSFSDEKSVPFNLYLPS
EELFAVRTDEQFDVHYSLAKEVLANVDRFLAHSPPPLSELSDLEYDIAKSFILEDLHSLP
YEEHLQNPKSTSVMAHALEDSQQYLEVGSGKLSHPSIKSSIFDMTNDWNSNKSCFHECDD
KIHNNIKSENLISNSHGGIHVDSTKNLVDKKTYDVYNNDCPVSLSDQSLLLFEDDNEFND
VHLSPLKSNEKSSCVSEEIPVSEMMAPISHFLISDELLLGDDSDPQDQIISDTNSWKSRE
NLKDRHVETPKKDEYVFDCSRDLFSVTFDLGFHSPESDDEIVEHASDRINNGLSDDLNRK
TLDIPEFKNTNYVSNQHGDCVEKFTSGTKSTVAREEIQSPDFVHFPVNAAECPEFMSPRF
GKFSLPVGEKAMSTPLSESKAMNSLSKIRKNILKTLDCNNQKSDLQSFKNTLSLTFGDSE
FSLEKAKSSEQTYLHPSYHYSAEDEQLFVSSESEDEISLRKCKKPKGNVLKSPEEQKSSE
VDSPVHAVKKRRILIPELSSSNESENFHRSQLEDFKCNRDARKGIKGQKRQSHVKGLARM
FLDDEAEVSEEDSNCVSSDENESENEQDSSILDFLNDDTHLSQAVNDSEMRAVYMKSLHS
PLMSNKNKMVHKKHNNMNIFSQIPEQDESYLEDSFCVAEVESSKSQSSGEEVCVDFSLIK
EDSFAEGNKKYKTRRALMLKQMNKENRTRSKKKLSRIVFPDDSSEEEKNEEGSRTVLHVH
LGSDDLDVVPCGPPSLPRGLSNAVGKLSPKPRQKMLPNLKDTSSEELGFKPQRHSKIKPM
SSPGPALESQKEDGQCPAGLKVESALEDPCTSQEFSFNSRPPVADTLPSLRPPVEGKRTC
ILVNSREITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSSRMVVERMSQSEMLNTANKNK
LVKQIQHLHSMFERICVIVEKDREKAGDTSRMFRRTKSYDSLLTALVGAGIRILFSCGQE
ETAHLLKELSSVEHRKNVGIHVPAVNTKTRDALQFYLSIPNISYITALNMCHQFSSVKKM
ANSSPQEISMYAQVTHQKAEEIYRYIHYEFDIQMLPKDLNQDRLKSDL
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacggcaaagaacgctcttccagacgtggggccccagccttgcccgacccgcc
cgggccccgggttgcagcctccggagggagctacccccggaccccggcggctccccggcg
cgtgcgtccgcggcggcccctccgcaggcccagcccgcggcggaggaggcccagcccgac
tcggatgacgacgtgttgctggtggcggtgttggaggccgagcagcagctgagggtagag
aatggcggcttctgcacctcctcgggctccctgtggatttatcctaccaattgtccggtg
cgggactaccagctgcacatctcccgcaccgccctgttctgtaacaccctggtctgcctg
cctaccgggctggggaagaccttcattgcggccgtggtcatgtacaatttctaccgctgg
ttcccttctggcaaggtggttttcatggcgcccaccaaacccctggtgacgcaacagatc
gaggcttgctttcaagtgatgggtattccgcagtcccacatggccgaattgacaggttcg
actcaagctctcaccaggaaggaaatatggtacagtaagagagttctgtttcttacacct
caggtcatggtaaatgaccttactagaggagcttgtcctgctgctgatatcaagtgtcta
gttgttgatgaagctcataaagctcttgggaactatgcttattgccaggttgtaagggaa
ctgcttaaatatacaagtcacttcagaattttggcacttagtgccacaccaggtagtgat
ataaaggctgtgcagcaggttattactaatctactcattgggcagatagagcttcgttcc
gaagattctccagatattttgccatattctcatgaaagacgagttgaaaagcttgttgtt
ccccttggggaagaactggcagccattcaaaaaacatacatccagattttggaaacattt
gcaagctctctgattcagaggaatcttttgatgagaagcgatatccccaatttaacaaag
taccagataattctggcaagagatcaatttaggaaaaacccatctccaaatattgtggga
atacatcaaggcataattgagggagagtttgccatttgtatcagtttatatcatggttac
gaattactgcagcaaatgggaatgagatcattatattcttttctttgtggaattatggat
ggaacaaaaggaatggcacgggcaaaaactgaacttagccgaaatgaggacttcatgaaa
ctctatagccatctagagtgcatttttgcacatacacctggcacttcagcaagtgataat
gctcgtatccacaaaggagatagaagtaaagattttttctatagtcatccaaagttaaag
aaattagaagaagttgtaattgaacatttcaggtcatggaatgctaaaaacacctctgaa
aagaaaaatgatgaaacaagagttatgattttttcatcatttcgagacagcgttcaggaa
attgcagaaatgcttttaaaacatcagccggttattagagtgatgacatttgttggccat
gctacagggaaaagcatgaaaggttttacccagaaggagcaattagaggtagtgagacga
tttcgtgatggtggttacaacacattggtctctacctgtgttggtgaagaaggtttggat
attggggaagttgatcttataatctgttttgatgcccagaagagcccgattcgcctgata
caacgaatggggagaactggccgcaaacgtcaaggcaggattgtggtgatccttgctgaa
ggccgtgaagagcggacgtacaaccagagtcagtccaacaaaagaaatatttataaagct
atttcaggtagcagacagatccttcattattaccaaggaagtccacgaatggttcctgat
gatatcaacccaaaattacacaaaatgttcatcactcatggtgtcttcgagtcagaaaag
gcatctcggagtgtgcggcgcaagtcctccagggaaagaatgaggcaaaatcagtcacgt
aaagattgcttcttaacagaagaagaatttaaattatggaacagactctatagattaaaa
gacagcgatgaaattaaggaaataaccttgccccaagttcattttccatctttacaagat
gaagaaaacatatcaactcaaacaccaactactggagttcatcagctgtctctctctgag
tggagagtatggcaggatcatcttttgcctacatatcaggtggaccattcagatcgatgc
caacactatgtaagcattatgcagatgatagaaggaatgagacatgaagagggtgaatgc
agctatgaattggaaatcaaatcttatttacaaatggaagatgttagcacaacatttagc
attcctaggaatgaatatttgaatcttgctaatgataccattactactcataagaaatct
ttactagcccagaatatacatcaaggcagtttgttctcgatggaatttgatgaagatcat
gatgaaatttttaaacaaacgcacaccaaaactactgatagtggttccctgaagaaacca
tcctgtaaagaaatgaaaaaagatgagcataaaggagaaaagaatgatgtgcatttttta
catagtgacacaaattttactgttcaaaatgtttctcaggtagacttaacaaatggtaaa
aggatttcaggttcacataatattgccgaaacatgcactgttaatcagctaggtgtgtca
tcagtggaatgtcagtttataaataagtcgaccatttcatttatgggaagtcttttagat
tctggttttaacagtttcagtgatgagaaatctgttcccttcaacttatatcttccatct
gaagaactttttgctgtgagaacagatgaacaatttgatgttcactactcattggcaaaa
gaggttctagctaatgtagacagatttttagctcattctcccccacccctcagtgaactc
tcagacttggaatatgatattgctaaaagttttatacttgaagatttgcattctctacca
tacgaagaacatttacaaaatcctaagtccacttctgtgatggcccatgcattggaagat
tcgcaacaatatttagaagtaggttcaggtaaacttagtcatccttctataaaaagttct
atctttgatatgactaatgactggaactccaacaagtcgtgtttccatgagtgtgatgat
aaaatacacaataatattaaaagtgaaaatttgatatctaatagtcatggtggaatacac
gtagattctacaaagaatttggtagacaaaaaaacctatgatgtttataacaatgactgc
ccagtatccctctctgaccagagtttgctactatttgaagatgataatgagtttaatgat
gtgcatctttctcccctaaagagcaatgaaaaatcttcatgtgtgtcagaggaaatacct
gttagtgaaatgatggctccaatctctcatttcttaatttctgacgagctactgcttggt
gatgattctgatccccaagatcaaatcatctctgatactaatagttggaaatctcgtgaa
aatttgaaagatagacatgtggaaacaccgaagaaggatgaatatgtttttgattgttct
agagatttattttctgttacctttgatttagggtttcatagtccagaatctgatgatgaa
atagtagaacatgcatcagataggattaacaatggactttcagatgatttgaatagaaag
actttagatattccggagttcaagaatacaaattatgtttcaaatcaacatggagattgt
gttgaaaaatttacaagtggaaccaaatctactgtagcaagagaagaaattcagagtcca
gattttgtacattttccagtgaatgcagcagagtgtccagaatttatgtctcctcgtttt
gggaagttttccttgccagtaggcgaaaaagctatgagtacaccactttctgaatcaaaa
gcaatgaattcactttctaaaataaggaagaatattcttaagacactagattgtaataat
caaaaaagtgatctacaaagtttcaaaaatacattgagtttaacttttggtgattcagaa
ttttctctagaaaaggccaaaagcagtgaacaaacttatcttcatccgtcatatcattac
tctgctgaagatgaacaattatttgtaagtagtgaaagtgaagatgagatttctctaaga
aaatgtaaaaaaccaaaaggaaatgttttaaagtcccctgaggaacagaagagtagtgaa
gttgattctcctgttcatgctgtcaaaaagcgcagaattcttattccagaattatcatct
agtaatgagagtgagaatttccacagatcacaattagaagacttcaaatgtaacagggat
gccagaaaaggaatcaaaggccaaaagagacagagtcacgtaaagggattggctaggatg
tttttagatgatgaagcagaagtttctgaagaagattccaattgtgtttcatcagatgaa
aatgagtcagagaatgagcaggattcctcaatacttgacttcctaaatgatgacactcac
ctttcacaagctgtaaatgattctgaaatgagggcagtttacatgaaatctttgcatagt
ccactgatgagcaataagaacaaaatggttcataagaaacataacaacatgaatattttc
tcacagattcctgaacaagacgaatcttatttagaagacagtttctgtgtcgctgaagta
gagtcctccaaaagccaatcaagtggcgaagaagtttgtgttgattttagcctaataaag
gaagatagttttgcagaagggaataaaaaatataaaacccgacgtgcactaatgctgaag
cagatgaacaaagaaaaccgtacacgttccaaaaagaagttatcgagaattgtttttcca
gatgattcaagtgaggaggaaaagaatgaagagggctcccgcactgtgctccatgttcac
ttgggtagtgatgatttggatgtggtgccttgtgggcctccatcactgcccaggggcctt
tctaatgcagtaggaaagctatcaccaaagccaagacaaaagatgcttcctaatttgaag
gacacaagttctgaggaattaggattcaagccacagagacatagtaaaatcaaacctatg
tcatcacctggccctgctcttgagtcacagaaagaagatggacaatgcccagctgggtta
aaggttgaaagtgctctggaggacccttgcacttcccaggaattctcctttaactcaaga
ccacctgtggctgacacgcttccttcccttagacctccagtggaaggaaaaaggacctgt
attcttgtaaatagtcgtgaaatcacttctggtttagaagtaatttcttccttaagagca
attcatgggttacaagtagaggtttgtcctctgaatggctgtgattacattgtgagtagc
cgcatggtggtagaaaggatgtcgcaatctgagatgttaaatactgccaataagaacaag
ctcgtcaagcagatccagcacttgcacagcatgtttgaaagaatatgtgtgattgtagaa
aaagacagagaaaaagcaggagacacatcaaggatgtttagaagaacaaagagctatgac
agtctgctaacggctttagttggtgcaggaatccgaattcttttcagttgtggacaagaa
gaaactgcacatttgctaaaggaactttcttcagtggaacacagaaagaacgttggcatt
catgttccagcagtgaatactaaaacacgcgatgcacttcagttttatttaagtattccc
aacataagttacataactgcattaaatatgtgccaccaattttcatctgtgaaaaagatg
gccaacagctcgccccaagaaatctccatgtatgcacaagtaactcatcaaaaagccgag
gagatctatagatatattcactatgaatttgacatacaaatgttaccaaaagatcttaac
caagatagactgaaatctgacctgtga
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integrated database retrieval system
