Dipodomys spectabilis (banner-tailed kangaroo rat): 122106554
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Entry
122106554 CDS
T07891
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsp01009
]
122106554 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122106554 (Sfpq)
03041 Spliceosome [BR:
dsp03041
]
122106554 (Sfpq)
Protein phosphatases and associated proteins [BR:
dsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122106554 (Sfpq)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122106554 (Sfpq)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122106554 (Sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
122106554
NCBI-ProteinID:
XP_042533886
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNKNRGPMGPGPGGPKPPIPP
PPPHQQQQQPPPQQQPPPQQPPPHQQPPPHQPPHQQPPPPPPDASKPVGPQGPGPAPGVS
SAPPAAGSAPPATPPATGAPPGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPPQAGGP
PPPPAGGPGPVPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQ
HHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPA
DITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRF
ATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARK
AFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTF
EYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEEL
RRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPR
ERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTER
FGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccggagtcgcggcggtggcggtggcggcttccaccggcgcgga
ggcggcggcggtcgtggaggccttcacgacttccgctccccgccgccaggcatgggcctg
aacaagaaccgcggcccaatgggcccgggcccaggaggccccaaacctccgatcccgccg
ccgcctccgcaccagcagcaacagcagccgccaccccagcagcagccgccgccacagcag
ccaccgccgcaccagcagccgccgccgcaccagccgccccatcagcagccgccgccgccg
ccaccggacgcctctaaaccggtcggtccacaggggcccggccccgcgccgggagtaagc
agcgccccgccggccgcgggctcggccccgccagccacccctccggccaccggcgccccg
ccagggcctggccctaccccgaccccgccgcctgcggtcacctcggcccctcccggggcg
cctccgcccgcgccgccgagcagcggggtcccgaccactcctcctcaggccgggggcccg
ccgccgcctcccgcagggggtccgggcccagtgcctaaacagggtccaggacctggcggc
cccaaaggcggcaaaatgcctggtgggccgaagcccggcggtggcccgggcctgagcacg
cctggcggccaccctaagcctccgcaccgaggcggcggggagccccgtggcggccgccag
caccaccccccctaccaccagcagcaccaccagggcccccctcccggcgggcccggcggc
cgcagcgaagagaagatctccgactcggagggattcaaagccaacttgtctctcttgagg
agacctggagagaaaacgtacacacagcgttgtcgattgtttgttgggaatctacctgct
gatatcacagaggatgagttcaaaagactgtttgctaaatacggagaaccaggagaagtt
tttatcaataaaggcaaaggattcgggtttattaaacttgaatcgagagccttggctgaa
attgccaaagctgaacttgatgatacacccatgagaggtagacagcttcgggttcgcttt
gctactcatgctgctgccctttctgttcgaaatctttcaccttatgtttccaatgaactg
ttggaagaagcctttagccaatttggtccgattgaaagggctgttgtaattgtggatgac
cgcggaagatctacagggaaaggcattgttgaatttgcttctaagccagcagcaagaaaa
gcatttgaaagatgcagtgaaggtgttttcctactgacaacaactcctcgtccagtcatt
gtggaaccacttgaacaactagatgatgaagatggtcttcctgaaaaacttgcacagaag
aatccaatgtatcagaaggagagagaaacaccaccccgatttgctcagcatggcacattt
gaatatgaatattctcagcgatggaagtctttggatgagatggaaaagcaacaaagggaa
caagttgagaaaaacatgaaggatgcgaaagacaaattggaaagtgaaatggaagatgct
tatcatgaacatcaggcaaatcttttgcgccaagatctgatgagacgccaggaagagtta
agacgcatggaagaacttcacaatcaggaaatgcagaaacgtaaagaaatgcaattaagg
caagaggaggaacgacgtagaagggaagaagagatgatgattcgccaacgcgagatggaa
gaacaaatgagacgacaaagagaggaaagttatagccgaatgggctacatggatccaaga
gaaagagacatgagaatgggtggtggaggagcaatgaacatgggagatccctatggttca
ggaggccagaaatttccacctctaggtggtggtggtggcataggttatgaagctaaccct
ggcgttccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgc
tttgggcagggaggtgcggggcctgtgggtggacagggtcctagaggaatgggtcctgga
actccagcaggatatggtagagggagagaagagtatgaaggtccaaacaaaaagccccga
ttttag
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integrated database retrieval system
