Dipodomys spectabilis (banner-tailed kangaroo rat): 122106606
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Entry
122106606 CDS
T07891
Symbol
Ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122106606 (Ythdc1)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122106606 (Ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122106606
NCBI-ProteinID:
XP_042533939
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKSEKKGSKRKSDRMESTDTKRQ
KPSVHSRQLISKPLSSSVSNNKRIVSTKGKSVTEYKNDEYPRSERNKRLDADRKIRLSSS
ASREPYKSQPEKACLRKRDPERRAKSPTPDGSERIGLEVDRRPSRSSQSSKEEVNSEEYG
SDHETGSSGSSDEQGNNTENEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE
EEDEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKK
ERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFL
IKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSES
HHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQE
IELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPED
YDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDSFTNLIPNRRFSGVRRDVFLNGSYND
YVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDK
RVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERER
LCDRDRDRGERGRYRR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagccgggaggagaaagatggagaacttaatgttctagatgatatcttg
actgaagtgccagaacaggatgatgaactgtataatccagagagtgaacaagataaaagt
gaaaaaaagggatcaaagagaaaaagtgaccgaatggaatctactgacaccaagcgacaa
aaaccttctgtccattcaagacaattgatttctaagccactaagttcatctgtcagcaat
aacaaacgaatagttagtacaaaaggaaagtcagtcacagaatataaaaatgacgaatat
ccaagatctgaaagaaacaagcggctagatgctgatcggaaaattcgtctttcaagcagt
gcctctagagaaccttataagagtcagcctgaaaaagcttgtctacggaaaagggatcct
gaaagaagagctaaatctcctacaccagatggttctgagagaattgggcttgaagttgat
agacgtccaagcagatccagtcaatcttcaaaggaagaagtgaactctgaagaatatggc
tctgaccatgagactggcagcagtggttcttcagatgaacaaggtaataacactgagaat
gaggaaggagtagaagaagatgtggaagaagatgaagaggtagaagaagatgcagaggaa
gatgaggaggttgatgaagatggagaggaggaggaggaggaggaagaggaagaagaggag
gaagaagatgaagaggaagaggaagaagagtatgaacaggatgagagagaccagaaggag
gaaggaaatgattatgacactcgaagtgaggccagcgactctggttctgaatctgtttcc
ttcacagatggatctgtcagatctggttcaggcacagatggatcagatgagaaaaagaaa
gaaaggaagagagctcgaggcatatcaccaattgtttttgatagaagtggaagctctgct
tcagagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgttcgtgct
gtccgaaaagatcaaaccagtaaactaaaatatgtccttcaggatgcaagatttttcctc
ataaagagtaacaaccatgagaatgtgtctcttgccaaagctaagggtgtatggtctacg
ctgcctgtaaatgagaaaaaactaaatcttgcattcagatctgcaaggagtgttatctta
atattttctgtcagagaaagtggaaaatttcaagggtttgcaagactttcttcagaatcg
caccatggaggatctcctatacactgggtgcttccagcaggaatgagtgctaaaatgctg
ggaggtgtctttaaaattgactggatatgcaggcgtgaattaccgttcactaagtcagct
catctcaccaatccttggaatgaacacaagccagtaaagattggacgtgatggacaggaa
attgaactcgaatgtggaactcagctctgtcttctatttccccccgatgaaagtattgac
ttgtatcaggtcattcataaaatgcgccacaagcgaagaatgcattctcagcccagatca
agaggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgaccagaagat
tatgatattcataacagcagaaagaaaccaaggattgactatccccctgagtttcaccag
agaccagggtatttaaaggatccacggtaccaggaagtagatagtttcacaaatcttatt
cccaacagacgattttcaggagttcgccgagatgtttttttaaatgggtcctacaatgat
tatgtgagggaatttcataacatgggaccaccaccaccttggcaaggaatgcctccgtat
ccggggatggaacagcctccacaccatccctactatcagcaccatgctcctcctccgcaa
gctcatcctccttactcaggacatcatccagtaccacacgaagcaagatacagagataaa
cgagtacatgattatgatatgagggtggatgatttccttcgccgcactcaagctgttgtt
agtggtcgtagaagtagacctcgtgaacgagatcgtgagcgagagcgagaccgccccaga
gataacagaagagacagagagcgagatagaggtcgtgatcgagaaagagagagagagcga
ttatgtgatcgggacagagaccgaggggagagaggtcgatatcgaagataa
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