Dipodomys spectabilis (banner-tailed kangaroo rat): 122106796
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Entry
122106796 CDS
T07891
Symbol
Nup54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122106796 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122106796 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122106796 (Nup54)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122106796 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
122106796
NCBI-ProteinID:
XP_042534274
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MAFNFGTPSGTSGTAAATAAPAGGFGGFGTTSTSAGSAFSFSAPANTGTTGLFSGTQNKG
FGFGTGFGTATGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLVVLVFNKKETDIRNQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATILYSHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYVDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttgggactccctcgggcacctccggcaccgctgccgccactgcggca
cccgcgggagggtttggaggatttgggacgacatcaacaagtgcaggttctgcattcagc
ttttctgccccagcaaacacaggcactactggactcttcagtggcactcagaacaaaggt
tttggatttggtactggttttggcacagcaacaggaactagtactggtttaggtactggt
ttgggaactggcctgggatttggaggattcaatacacagcagcaacagcagcaaactaca
ttaggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgataaat
actgcaagtgctctttctgctccaacattattgggagatgagagagatgctattttggca
aaatggaatcaactgcaagccttttggggaacaggaaaaggatatttcaacaataatatt
cctccagtagaatttacacaagaaaatcccttttgtcgatttaaggctgtaggttatagc
tgtatgccaaataataaagatgaagatggtctagtggttttagttttcaacaagaaagaa
acagatattcgaaatcaacaacagcagttggtagaatcactacataaagttttgggagga
aaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaa
gttgtcatttatgttgttgagcgttctcctaatggtacctcaagaagagttccagctaca
atactctactcccattttgaacaagccaatataaaaacacagttgcagcaacttggtgtc
acactttctatgacaagaacagaactttctcctgcacagatcaaacagcttttacagaat
cctcctgctggtgttgatcctattatttgggaacaagccaaggtggataatcctgattct
gaaaagttaattcctgtacccatggtgggtttcaaagaacttcttcgaagactgaaggtt
caagatcagatgactaagcagcatcagaccagattagatatcatatctgaagatattagt
gaactacaaaagaatcagactacaaccgtggccaaaattgcacaatacaagaggaaactc
atggatctgtcccatagaactttacaggtcctaatcaaacaggaaattcaaagaaagagt
ggttatgccatccaggctgacgaagagcagttgcgggttcagttagatacaatccagtgt
gaactaaatgcacctactcagttcaagggccggctaaatgaactgatgtcccagatcagg
atgcagaatcattttggagcagtcaaatctgaagaaagatactatgtagatgcagatcta
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgattagc
atcataaaagatgatctagaagatataaaattggtagaacatggattgaatgaaaccatc
cacatcagaggcggtgtctttagttga
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