KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122106966
Entry
122106966         CDS       T07891                                 
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
  KO
K14296  nuclear pore complex protein Nup153
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013  Nucleocytoplasmic transport
dsp03250  Viral life cycle - HIV-1
dsp05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122106966 (Nup153)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122106966 (Nup153)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122106966 (Nup153)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122106966 (Nup153)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122106966 (Nup153)
SSDB
Motif
Pfam: Nup153 Zn_ribbon_RanBP Nup_retrotrp_bd
Other DBs
NCBI-GeneID: 122106966
NCBI-ProteinID: XP_042534439
LinkDB
Position
Unknown
AA seq 1465 aa
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KNENACSCSSDANEVPHWSENRDNDRMIYADEERSNINDGRITPEPAVGNTEESSTTNTA
SNYPDVLTRPSLHRSHLNFSMLETPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSVLKASQLGDSPFYPGKTTYGGAAAAARQSKLRNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSLNFPFSRSGMDTTVFQAKTEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFRPSLTPSGELRKTNERIDKKHSTIYEKSTTSRQNREH
ESGFSYPNFSIPAANGISSGAGCGGGKMRRERTRFVAAKPPEEEEMEVPVLPKISLPITS
SSLPTFNFSSPVNTTSSPSPISPPQSLTNKVQMTSPGSTGSPMFRFSSPIVKSTEADVLL
PPPSIGFTFSVPVAKTELSGSSSTSEPIRSTSAPDNIASNNTSTSCKKRDEEYEGPFRPA
KIQKEGSVLDILKNPGFASPKVDSFAAQPTTTSPVVYTRPAISTFSSSGTGFGESLKAGS
SWQCDTCLVQNKVTDNKCIACQAAKLPPRETAKQSGIGTSSKSGKATPLSGTGFGDKFKP
VMGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVVSESPETMTASTSSCTVAT
GSLGFGDKFKRPVGSWECPVCCVSNNSEDNKCVSCMSEKPGSSVPVSSSSAVPVSLSSGG
CLGLDKFKKPEGSWDCEVCLVQNKADSTKCVACESAKPGMKSEFKGFGGTSSPSLNPAAS
SFKFGISSSGPSQTLTSTGNFKFGDQGAFKIGVTSDSGSVNSMNESFKFSKPTGDFKFGI
SSDSKPEEVKKDSQTDNNFKFGLCSGLSNPVSSAPFQFAVASLGQQEKKEELPKSSSSGF
SFGTGTGVSNPTPAATDTAVTSESKSTFSFGTLETKNVSVSPFTCKTEAKKEETPATKAG
FTFGSMESASLPSASVFALGRTEEKQQEPVTSTSLVFGKKADNQEPKCQQVFSFGNSEQT
KDESSSKSTFSFSMVKPPEKESEQPTKSTFAFGAQTSTTADQGASKPVFNFLNNSSSSSS
TPTTSAGGGIFGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFSQDSKPA
TTSSTGSAVTPFVFGPGASSNNTATSGFSFGATTTSSTAGSSFVFGSAPSAPSASPAFGA
NQTPTFGQTQGASQPNPPSFGSISSSTALFPASSQPAPPTFGTVSSSSQPPVFGQQPSQS
AFGSGSAPNSSSVFQFGSSTTNFNFTFGANPSTPAASAQPSGSGGFAFNQSSAAFTVGSN
GKNLFSSSGTSVSGRKIKTAVRRRK
NT seq 4398 nt   +upstreamnt  +downstreamnt
atggcctccggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgc
tgccaccaggggccaattaagccttaccagcaggggcgaccacagcaccagggcattctt
agtagagttacagaatctgttaagaacattgtgccaggttggttacaaagatacttcaat
aagaatgaaaatgcatgtagctgttcatcagatgcaaatgaagtaccacactggtcagaa
aatcgagacaatgaccgtatgatctatgctgatgaggaaagatctaatatcaatgatggg
agaatcacccctgagccagcagttggcaacacagaagaatcatcaacaaccaatactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagtcacttgaatttctcc
atgttggaaacccctgcattacactgtcagccatctacatcctctgcatttccaattggc
agttctggattttcccttgtaaaggaaattaaagattctacctctcagcatgatgatgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagcagtttca
aagaatacttccttgccacctctgtggtccccagaagctgaacgttctcattcactctca
cagcatactgccaccagctcaaaaaaaccagcatttaacttgtctgcctttggaacactg
tccccttcacttgggaattcttcagttcttaaagcaagtcagcttggagattctcctttc
tatccaggaaaaacaacgtatggtggggcggcagcagctgcaagacagtccaaactacga
aatacaccttatcaggcaccggttagaagacagatgaaagctaagcaacttaatgcacaa
tcttatggtgtgaccagttccacagctagacgaatattgcagtctttagagaagatgtca
agccctctagcggatgcaaaaagaattccatctgctgtttcttctctcaattttcctttc
agtagaagtgggatggataccacagtctttcaggccaaaacagaaaaggtggactctcag
tatccccctgttcagagactcatgaccccgaagccagtttccatagcaacaaatagaact
gtctattttagaccatctctaaccccatctggtgaattaaggaagactaatgaaaggata
gataaaaagcacagtactatatatgaaaaaagtacaacatcaaggcaaaatagagagcac
gaaagtggcttttcgtacccaaatttcagtattccagcagccaatggtatatcatctgga
gcaggttgtggaggtggcaagatgagacgagagagaacacgctttgttgctgccaagcct
ccagaggaagaggaaatggaagtaccagtgttaccgaaaatctctctaccaattaccagt
tcttcacttcctaccttcaattttagctctcctgtgaatacaacttcctctccctcaccc
atcagtcctcctcaatcattgacaaacaaggtacaaatgacctccccaggcagcactggc
agtcctatgtttagattttcatctccgattgtaaaatctactgaggcagatgtactacta
cctccaccatctattggatttacatttagtgtgcctgttgcaaaaacagaactttctggc
tctagtagtacttcagaaccaattagaagtacttcagctccagataacattgcatcaaat
aatacaagtacaagctgtaagaagcgagacgaagaatatgagggtccttttagacctgcc
aaaatccagaaagaaggaagtgttctagatattctgaaaaaccctggttttgcatcacca
aaggtagattcttttgctgctcaacctactactacaagtccagtagtttatacaagacca
gcaataagtaccttttcttctagtgggactggatttggagaaagtttaaaagctggatcc
tcttggcagtgtgacacatgtcttgtccagaacaaagtaacagacaataagtgtatagct
tgccaagcagcaaaattgccaccaagagaaactgctaaacagtctggaattgggacatca
agcaaaagtggcaaagcaactcctctatcagggacaggctttggagacaaatttaaacca
gtgatgggaacctgggactgtgatacctgtttggtgcaaaacaaacctgaagcagtaaaa
tgtgttgcctgtgaaacaccgaagcctggaactggtgtgaagcgagtccttacattgaca
gtggtttcagaaagtcctgaaacgatgactgcttcgacttctagctgtactgtggccact
ggtagcttaggattcggagataaattcaaaaggcctgtgggatcttgggagtgtccagtg
tgctgtgtttctaataattcagaagacaacaaatgtgtgtcttgtatgtctgagaaacct
ggaagttcagtacctgtttcaagtagcagtgctgtacctgtctctttgtcatctggaggc
tgtctgggattggacaagttcaaaaagcctgagggcagctgggactgtgaagtgtgccta
gtgcagaataaagcagactccactaaatgtgtagcatgtgaaagtgcaaagccaggcatg
aaatcagagtttaaaggctttggaggtacatcatccccatctttgaacccagcagcttca
tccttcaaatttggtatctcatcttctgggccttctcagaccttaacaagcactggaaat
tttaaatttggagatcagggggcatttaaaataggtgttacatctgactcggggtctgtt
aactccatgaatgaaagctttaaattttctaaaccaactggagattttaaatttggaatt
tcatctgattctaaacctgaagaagttaagaaagacagtcagactgataacaattttaaa
tttggactttgttctggtttaagcaaccctgtttcttcagctccatttcagtttgcagtg
gctagccttgggcagcaagaaaagaaagaggaattacctaaatcttcatcttcaggcttt
agctttggaactggtacgggtgttagtaaccccacccctgctgctactgacactgcagtg
acctctgagagcaagagcaccttcagctttggaaccctagaaaccaagaatgtctcagtg
tctcctttcacatgtaaaacggaagcaaaaaaagaagagacgcctgccaccaaggcaggg
ttcacttttggcagtatggaatctgcctctctaccatctgcctcagtatttgctttggga
aggacagaagagaagcaacaagagcctgtcacttctacttctctagtgtttgggaaaaaa
gctgacaaccaggagccaaagtgtcaacaagtattttcctttgggaattcagaacaaacc
aaagatgagagttcttcaaaatcaacatttagtttcagtatggtaaaaccacctgagaag
gaatcagaacagccaactaaatccacttttgcctttggagctcaaactagtactacagct
gatcaaggtgcatcaaaaccagtttttaacttcttgaacaacagttcctctagttcaagt
accccaactacttcagcaggtggaggcatatttggtagttccacatcttcctccaaccca
cctgtggctgcctttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggt
aactctgctgaatccagtacatctcagtctttgctattttctcaggatagcaaaccagct
actacatccagcacaggttcagctgtcaccccatttgtctttggaccaggagccagcagt
aacaacactgcaacctctgggttcagctttggagccacaaccacttctagtactgcagga
tcctcctttgtgtttggtagtgcaccttcagcaccatctgccagtccagcatttggtgct
aaccagacccctacgtttggacaaactcaaggtgccagccagcctaatcctccaagcttt
ggatctatatcatcttcaacagcattgtttcctgctagttctcagcctgcaccacctact
tttggaacagtatcaagcagtagccagcctcctgtgtttggacaacagcctagtcaatct
gcatttggctctggttcagctcctaattccagttctgtattccaatttggcagcagcact
acaaatttcaatttcacatttggtgcaaatcccagtacacctgcagcctcagcccagcct
tcaggctctgggggctttgcatttaaccagtcttcagcagcatttactgtggggtcaaat
gggaaaaatttgttctcctcttctggaacttcagtttctggtcgcaagataaagactgct
gttagacgtaggaaataa

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