Dipodomys spectabilis (banner-tailed kangaroo rat): 122106966
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Entry
122106966 CDS
T07891
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03250
Viral life cycle - HIV-1
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122106966 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122106966 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122106966 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122106966 (Nup153)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122106966 (Nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
122106966
NCBI-ProteinID:
XP_042534439
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KNENACSCSSDANEVPHWSENRDNDRMIYADEERSNINDGRITPEPAVGNTEESSTTNTA
SNYPDVLTRPSLHRSHLNFSMLETPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSVLKASQLGDSPFYPGKTTYGGAAAAARQSKLRNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSLNFPFSRSGMDTTVFQAKTEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFRPSLTPSGELRKTNERIDKKHSTIYEKSTTSRQNREH
ESGFSYPNFSIPAANGISSGAGCGGGKMRRERTRFVAAKPPEEEEMEVPVLPKISLPITS
SSLPTFNFSSPVNTTSSPSPISPPQSLTNKVQMTSPGSTGSPMFRFSSPIVKSTEADVLL
PPPSIGFTFSVPVAKTELSGSSSTSEPIRSTSAPDNIASNNTSTSCKKRDEEYEGPFRPA
KIQKEGSVLDILKNPGFASPKVDSFAAQPTTTSPVVYTRPAISTFSSSGTGFGESLKAGS
SWQCDTCLVQNKVTDNKCIACQAAKLPPRETAKQSGIGTSSKSGKATPLSGTGFGDKFKP
VMGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVVSESPETMTASTSSCTVAT
GSLGFGDKFKRPVGSWECPVCCVSNNSEDNKCVSCMSEKPGSSVPVSSSSAVPVSLSSGG
CLGLDKFKKPEGSWDCEVCLVQNKADSTKCVACESAKPGMKSEFKGFGGTSSPSLNPAAS
SFKFGISSSGPSQTLTSTGNFKFGDQGAFKIGVTSDSGSVNSMNESFKFSKPTGDFKFGI
SSDSKPEEVKKDSQTDNNFKFGLCSGLSNPVSSAPFQFAVASLGQQEKKEELPKSSSSGF
SFGTGTGVSNPTPAATDTAVTSESKSTFSFGTLETKNVSVSPFTCKTEAKKEETPATKAG
FTFGSMESASLPSASVFALGRTEEKQQEPVTSTSLVFGKKADNQEPKCQQVFSFGNSEQT
KDESSSKSTFSFSMVKPPEKESEQPTKSTFAFGAQTSTTADQGASKPVFNFLNNSSSSSS
TPTTSAGGGIFGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFSQDSKPA
TTSSTGSAVTPFVFGPGASSNNTATSGFSFGATTTSSTAGSSFVFGSAPSAPSASPAFGA
NQTPTFGQTQGASQPNPPSFGSISSSTALFPASSQPAPPTFGTVSSSSQPPVFGQQPSQS
AFGSGSAPNSSSVFQFGSSTTNFNFTFGANPSTPAASAQPSGSGGFAFNQSSAAFTVGSN
GKNLFSSSGTSVSGRKIKTAVRRRK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgc
tgccaccaggggccaattaagccttaccagcaggggcgaccacagcaccagggcattctt
agtagagttacagaatctgttaagaacattgtgccaggttggttacaaagatacttcaat
aagaatgaaaatgcatgtagctgttcatcagatgcaaatgaagtaccacactggtcagaa
aatcgagacaatgaccgtatgatctatgctgatgaggaaagatctaatatcaatgatggg
agaatcacccctgagccagcagttggcaacacagaagaatcatcaacaaccaatactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagtcacttgaatttctcc
atgttggaaacccctgcattacactgtcagccatctacatcctctgcatttccaattggc
agttctggattttcccttgtaaaggaaattaaagattctacctctcagcatgatgatgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagcagtttca
aagaatacttccttgccacctctgtggtccccagaagctgaacgttctcattcactctca
cagcatactgccaccagctcaaaaaaaccagcatttaacttgtctgcctttggaacactg
tccccttcacttgggaattcttcagttcttaaagcaagtcagcttggagattctcctttc
tatccaggaaaaacaacgtatggtggggcggcagcagctgcaagacagtccaaactacga
aatacaccttatcaggcaccggttagaagacagatgaaagctaagcaacttaatgcacaa
tcttatggtgtgaccagttccacagctagacgaatattgcagtctttagagaagatgtca
agccctctagcggatgcaaaaagaattccatctgctgtttcttctctcaattttcctttc
agtagaagtgggatggataccacagtctttcaggccaaaacagaaaaggtggactctcag
tatccccctgttcagagactcatgaccccgaagccagtttccatagcaacaaatagaact
gtctattttagaccatctctaaccccatctggtgaattaaggaagactaatgaaaggata
gataaaaagcacagtactatatatgaaaaaagtacaacatcaaggcaaaatagagagcac
gaaagtggcttttcgtacccaaatttcagtattccagcagccaatggtatatcatctgga
gcaggttgtggaggtggcaagatgagacgagagagaacacgctttgttgctgccaagcct
ccagaggaagaggaaatggaagtaccagtgttaccgaaaatctctctaccaattaccagt
tcttcacttcctaccttcaattttagctctcctgtgaatacaacttcctctccctcaccc
atcagtcctcctcaatcattgacaaacaaggtacaaatgacctccccaggcagcactggc
agtcctatgtttagattttcatctccgattgtaaaatctactgaggcagatgtactacta
cctccaccatctattggatttacatttagtgtgcctgttgcaaaaacagaactttctggc
tctagtagtacttcagaaccaattagaagtacttcagctccagataacattgcatcaaat
aatacaagtacaagctgtaagaagcgagacgaagaatatgagggtccttttagacctgcc
aaaatccagaaagaaggaagtgttctagatattctgaaaaaccctggttttgcatcacca
aaggtagattcttttgctgctcaacctactactacaagtccagtagtttatacaagacca
gcaataagtaccttttcttctagtgggactggatttggagaaagtttaaaagctggatcc
tcttggcagtgtgacacatgtcttgtccagaacaaagtaacagacaataagtgtatagct
tgccaagcagcaaaattgccaccaagagaaactgctaaacagtctggaattgggacatca
agcaaaagtggcaaagcaactcctctatcagggacaggctttggagacaaatttaaacca
gtgatgggaacctgggactgtgatacctgtttggtgcaaaacaaacctgaagcagtaaaa
tgtgttgcctgtgaaacaccgaagcctggaactggtgtgaagcgagtccttacattgaca
gtggtttcagaaagtcctgaaacgatgactgcttcgacttctagctgtactgtggccact
ggtagcttaggattcggagataaattcaaaaggcctgtgggatcttgggagtgtccagtg
tgctgtgtttctaataattcagaagacaacaaatgtgtgtcttgtatgtctgagaaacct
ggaagttcagtacctgtttcaagtagcagtgctgtacctgtctctttgtcatctggaggc
tgtctgggattggacaagttcaaaaagcctgagggcagctgggactgtgaagtgtgccta
gtgcagaataaagcagactccactaaatgtgtagcatgtgaaagtgcaaagccaggcatg
aaatcagagtttaaaggctttggaggtacatcatccccatctttgaacccagcagcttca
tccttcaaatttggtatctcatcttctgggccttctcagaccttaacaagcactggaaat
tttaaatttggagatcagggggcatttaaaataggtgttacatctgactcggggtctgtt
aactccatgaatgaaagctttaaattttctaaaccaactggagattttaaatttggaatt
tcatctgattctaaacctgaagaagttaagaaagacagtcagactgataacaattttaaa
tttggactttgttctggtttaagcaaccctgtttcttcagctccatttcagtttgcagtg
gctagccttgggcagcaagaaaagaaagaggaattacctaaatcttcatcttcaggcttt
agctttggaactggtacgggtgttagtaaccccacccctgctgctactgacactgcagtg
acctctgagagcaagagcaccttcagctttggaaccctagaaaccaagaatgtctcagtg
tctcctttcacatgtaaaacggaagcaaaaaaagaagagacgcctgccaccaaggcaggg
ttcacttttggcagtatggaatctgcctctctaccatctgcctcagtatttgctttggga
aggacagaagagaagcaacaagagcctgtcacttctacttctctagtgtttgggaaaaaa
gctgacaaccaggagccaaagtgtcaacaagtattttcctttgggaattcagaacaaacc
aaagatgagagttcttcaaaatcaacatttagtttcagtatggtaaaaccacctgagaag
gaatcagaacagccaactaaatccacttttgcctttggagctcaaactagtactacagct
gatcaaggtgcatcaaaaccagtttttaacttcttgaacaacagttcctctagttcaagt
accccaactacttcagcaggtggaggcatatttggtagttccacatcttcctccaaccca
cctgtggctgcctttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggt
aactctgctgaatccagtacatctcagtctttgctattttctcaggatagcaaaccagct
actacatccagcacaggttcagctgtcaccccatttgtctttggaccaggagccagcagt
aacaacactgcaacctctgggttcagctttggagccacaaccacttctagtactgcagga
tcctcctttgtgtttggtagtgcaccttcagcaccatctgccagtccagcatttggtgct
aaccagacccctacgtttggacaaactcaaggtgccagccagcctaatcctccaagcttt
ggatctatatcatcttcaacagcattgtttcctgctagttctcagcctgcaccacctact
tttggaacagtatcaagcagtagccagcctcctgtgtttggacaacagcctagtcaatct
gcatttggctctggttcagctcctaattccagttctgtattccaatttggcagcagcact
acaaatttcaatttcacatttggtgcaaatcccagtacacctgcagcctcagcccagcct
tcaggctctgggggctttgcatttaaccagtcttcagcagcatttactgtggggtcaaat
gggaaaaatttgttctcctcttctggaacttcagtttctggtcgcaagataaagactgct
gttagacgtaggaaataa
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