Dipodomys spectabilis (banner-tailed kangaroo rat): 122107018
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Entry
122107018 CDS
T07891
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04330
Notch signaling pathway
dsp05017
Spinocerebellar ataxia
dsp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122107018 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122107018 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
122107018 (Atxn1)
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Paralog
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
122107018
NCBI-ProteinID:
XP_042534521
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKVTAPPSDNHRADGPVAAAAAWLPGHPPGSRG
PGGGRHGPVGPSTELGLQQGIGLHKALSTGLDYSPPSAPRSVPSATTLPAAYPPPQSGTP
VSPVQYAHLPHTFQFMGSSQYSGPYAGFLPSQLISPSANPVTSTVATAGGATTPSQRSQL
EAYSTLLANVGGLSQAAGHKIEPQQQPPPPPPPQHLGRTPGLLTPGSPPPTPQNQYVHIS
SSPQSAGRTASPPAIPVHLHAHQAMIPHTLTLGPSSQVVVQYGGGDPGGHHFVPREPSKK
DGGSSSRLPQAKEVLNGEMEKGRRYGAPASADLGLGKAGSKSLPHPYEPRHVVVHPSPAD
YSSRDPPGVRASVMVLPNSSSTPASDLEAQQAAAHREASPSALNDKSGLHLGKAGHHHRS
YALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIP
GTQPLLIPVGSPDMDTPGAASAIVTTSPQFVTTALPKSDNFNPEALVTQAAYPAMVQAQI
HLPVVQSVASPAAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNELKIDS
STVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLP
CSKLSVGDVCISLTLKNLKNGSVKKSQPVDPASVLLKHAKPDSLVGSRHRYAEQENGINP
GSTQVLSENGELKFPERTGLPAASFLTKTEPSKPTATRKRRWSAPETRKLEKSEDEPPLT
LPKPSLIPQEVKICIEGRSNVGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagcggagcaatgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaggagaaggtcaccgccccgcccagcgacaaccaccgggcg
gacggcccggtggcggcggcggccgcgtggctccccggccaccccccgggcagccggggc
cctgggggagggcggcacgggccggtggggccgtccaccgagcttggtttacaacaggga
ataggtttacacaaagcactgtccaccgggctggactactccccgcccagtgctcccagg
tcggtcccctcggccaccacgctgcccgcggcctaccctccgccgcagtcggggaccccg
gtgtctccggtgcagtacgcccacctgccgcacaccttccagttcatgggctcctcccag
tacagcggaccctacgccggctttctcccttcacagttgatctccccctcggccaacccc
gtcaccagtacggtggccacggccgggggcgccaccactccatcccagcgctcccagctg
gaggcctattccactctgctggccaacgtgggcggtctgagccaggccgctgggcacaag
atcgagccgcagcagcagccgccgccgccgccgccgccgcagcacctgggcaggaccccc
gggctcctcaccccggggtcccctccgcccaccccgcagaaccagtacgtgcacatctcc
agctctccgcagagcgccgggcgcacggcctcgccgccggccatccccgtccacctgcac
gcgcaccaggccatgatcccacacacgctcaccctgggcccgtcgtcccaggtggtggtg
cagtacggcggcggcgaccccggcggccaccacttcgtcccccgtgagcccagcaagaaa
gacggaggcagcagcagcaggctgccgcaggccaaggaggtgttgaatggggagatggag
aagggccggcggtacggggcgcccgcctctgccgacctgggattgggcaaggcgggcagc
aaatcgctcccgcacccttacgagcccaggcacgtggtggtccaccccagccccgccgac
tacagcagtcgagatccacccggggtccgcgcgtccgtcatggtcctccccaacagcagc
agcacgcccgcatccgacctggaggcccagcaggccgcggcgcatcgcgaggcctccccg
tccgccctcaacgacaagagcggcctgcacctcgggaaggccggccaccaccaccggtcc
tacgcgttgtccccccacacggtcatccagaccacacacagtgcttcagagcctctcccc
gtgggactgccggccaccgccttctacgcgggcactcagcccccggtcatcggctacctg
agcggccagcagcaggcgatcacctacgcaggcagcctgccccagcacctggtgatccct
ggcacccagcccttactcatcccagtgggcagtccggatatggacaccccgggggcagcc
tctgccatcgtcaccacgtcgcctcagttcgtcaccaccgccctgcccaagagtgacaac
tttaaccccgaggccctggtcacccaggctgcctacccagccatggtccaggctcagatc
cacctacccgtggtccagtcggtggcctcgcccgccgcggtgccgcccacgctgccaccc
tacttcatgaaaggctccatcatccagctggccaacggggagctgaagaaggtggaggac
ctgaagacggaagacttcatccagagcgcggagataagcaacgagctgaagatcgactcg
agcacggtggagaggatcgaggacagccacagccccggggtggccgtgatacagttcgct
gtcggggagcatcgggcacaggtcagcgttgaagtcttggtagagtatccattcttcgtg
tttggacagggctggtcatcctgctgtccagagagaacgagccagctctttgatttacca
tgttccaaactctcagttggggacgtctgcatctcgctcaccctcaagaacctgaagaat
ggctctgttaaaaagagccagcccgtggatcctgccagtgttctgctgaaacacgccaag
cccgacagcctggtgggcagtagacacaggtatgccgagcaggaaaacggaattaatccc
ggaagtacccaggtactctctgagaacggtgaactgaagtttccagagagaacaggattg
cctgcagcatccttcctcaccaaaacagaacccagcaagcccacagccacgaggaagagg
aggtggtcagcacccgagacccgcaaactggagaagtcagaagatgagccacctttgact
cttcccaagccttctctaattcctcaggaggttaagatctgcattgaaggccgctccaac
gtgggcaagtag
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