Dipodomys spectabilis (banner-tailed kangaroo rat): 122107140
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Entry
122107140 CDS
T07891
Symbol
Tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04518
Integrin signaling
dsp05165
Human papillomavirus infection
dsp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122107140 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122107140 (Tnc)
04518 Integrin signaling
122107140 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122107140 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122107140 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122107140 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122107140 (Tnc)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122107140 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
DUF7949
DUF4998
NDNF
fn3_2
hEGF
CBX7_C
EGF
Motif
Other DBs
NCBI-GeneID:
122107140
NCBI-ProteinID:
XP_042534688
LinkDB
All DBs
Position
Unknown
AA seq
2110 aa
AA seq
DB search
MGFMTRLLSGIFLVLLALPSEGGVLKRIIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLFTPSESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
DLLNRLEELEALVSSLREQCTMGAGCCLQPVEGRLDSRPLCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCSLRGQCLDGQCVCAAGFAGADCSEPACPSDCNDQGRCVQGACVCFE
GYTGPDCGREVCPGPCSEEHGTCMDGRCVCREGFAGADCREPLCLHGCRGRGRCVENECV
CDEGFTGDDCGELICPHDCFDRGRCLNGTCDCDEGFAGEDCGQLACPHDCRGRGRCHEGQ
CVCDEGFAGPDCGERRCPADCHHRGRCLAGRCECDAGFAGPDCGERQCPRGCGGRGRCAD
GQCVCDEGYTGEDCGQRRCPGDCHGRGRCVQGRCVCEPGYQGFDCGDMSCPGDCHGRGRC
VNGMCVCDDGFTGEDCRERRCPRDCSLRGRCVDGRCECEPGFAGPDCAQLACPADCHGQG
RCVDGQCVCHEGFMGRDCQERRCPSDCHGQGRCVDGRCACHEGFAGPDCAQRSCPSDCHG
LGQCVSGRCICQEGYAGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLRRVTTTRLDAPSQLEVKDITDTTALVTWFKPLAEIDSIELSYGAK
DMPGDRTTIDLTHDENQYSIGNLKPDTEYEVSLVSRRVDMSSNPAKETFTTGLDAPRNLR
RVSQTDNSITLEWRNVKAAIDNYRIKYAPISGGDHAEVDVPKSQQATTKTTLMGLRPGTE
YGIGVSAVKEDKESNPATINAATDMDAPKDLQVSETTENSLTLLWRAPLAKFDRYRLNYS
LSTGQSGEAQLPKDTTSYVLTGLQPAQEYTIVLTAEKGRHKSKPAHVKASTEQIPELENL
TVTEVGWDGLTLNWTAADQAYEHFVIQVQEANKVEATQNLTVPGSLRAVDIPGLKASTPY
RVSIYGVIRGHRTPILSVEASTGETPTLGEVMVAKLGWDALTLNWTAAEGIYEHFLIQVQ
EADVLEVAQNRTVPGGLRSTDLPGLKATTRYRVTIRGVTQDFSTAPLSVEVLTEEVPGLG
NLTVTKRGWSALRLDWTTPDETYDQFIIQVRGADQVEEAHNLTVPGSLRSVEIPGLRAGS
PYTITLHGVIRGHSTQPLVLEVITEDLPQLGDLAVTEVGWDGLTLNWTAADQAYEHFVIQ
VQEANKVEATQNLTVAGSLRAVDIPGLKASTPYRVSIYGVIRGHRTPVLSTEASTVKEPD
IGNLNVSDVTPESFNLSWTATDEIFETFTIEIIDSNRLLQMVEYNISGAERTAHISGLPP
STDFIIYLSGLAHSLRTKTISATVTTEAEPEVDNLLVSDATPDGFRLSWTADEGIFDSFV
LKIRDTKKQSEPLEITLPSPERTRDVTGLREATEYEIELYGISKGRQSQPVSAIATTAMG
PPKEITFTDITENSATVSWTAPTAQVENFRITYVPVTGGDPSIVTVDGSKTETRLVKLTP
GMEYHVSVIAMKGFEESDPVSGSLTTALDGPSGLVTANITDSEALAMWQPAIATVDSYVI
SYTGERVPEITRTVSGNTVEYALADLEPATEYTLRIFAEKGPQKSLTITTKFTTDLDSPR
DLTATDIQSETALLTWRPPRASVTGYLLVYESVDGTTKEVIVGPDTTSYSLADLSPSTHY
TARIQALSGSLRSKLIETIFTTIGLLYPFPRDCSQAMLNGDTTSGLYTIYLNGNKSQSLE
VYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYE
LRVDLQDHGDTAYAVYDRFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDS
AITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNF
RNLEGRRKRA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgggattcatgactcggctactgtcgggcatttttctagtgttgcttgccctcccttct
gaaggtggggtcctgaagagaatcatccgacacaagcgacagagtggggtgaatgtcacc
ttgccagaggagaatcagccagtcgtgtttaatcatgtctataacatcaagctacccgtg
gggtcacagtgttctgtagatctggaatcagccagtggggaaaaagacctgttcacacct
tcagagtccagtggaagtttccaagaacacaccgtggatggagagaatcaaatcgtgttc
acacatcgcatcaacattccccgccgggcctgcggctgtgccgctgccccagacgtgaag
gatctgctgaacagactggaggagctagaggccctggtgtcctccctgagagagcagtgc
accatgggagcaggctgctgtctccaacctgtggaaggccgcctggactccaggcctctc
tgcagcggccggggcaacttcagcacggaaggctgcggctgtgtttgcgaaccgggctgg
aaaggccccaactgctcggagcccgagtgtccgggcaactgcagcctgcgcggccagtgc
ctggacgggcagtgcgtgtgcgccgcgggcttcgcgggcgccgactgcagcgagccggcc
tgtccctccgactgcaacgaccagggccgctgcgtgcagggcgcctgcgtctgcttcgag
ggctacacggggcccgactgcggccgggaggtctgcccggggccctgcagcgaggagcac
ggcacctgcatggacgggcggtgcgtgtgccgggagggcttcgcgggcgccgactgccgc
gagcccctgtgcctccacggctgccgcggccgcgggcgctgcgtggagaacgagtgcgtg
tgcgacgagggcttcacgggcgacgactgcggcgagctcatctgcccgcacgactgcttc
gaccgcggccgctgcctcaacggcacctgcgactgcgacgagggcttcgcgggcgaggac
tgcggccagctggcctgtccccacgactgccgcggccggggccgctgccacgagggccag
tgcgtgtgcgacgagggcttcgcgggcccggactgcggggagcggcgctgcccggccgac
tgccaccaccgcggccgctgcctggccgggcgctgcgagtgcgacgcgggcttcgcgggg
cccgactgcggggagcggcagtgcccgcggggctgcggcgggcgcggccgctgcgccgac
ggccagtgcgtgtgcgacgagggctacaccggcgaggactgcggccagcggcgctgcccc
ggcgactgccacggccgcggccgctgcgtccagggccgctgcgtgtgcgagccgggctac
cagggcttcgactgcggcgacatgagctgccccggcgactgccacgggcgcggccgctgc
gtgaacggcatgtgcgtctgcgacgacggcttcaccggcgaggactgccgggagcgccgg
tgcccccgcgactgcagcctccgcggccgctgcgtggacggccgctgcgagtgcgagccc
ggcttcgcgggccccgactgcgcgcagctcgcctgccccgccgactgccacggccagggc
cgctgcgtggacggccagtgcgtctgccacgagggcttcatgggccgagactgccaggag
cgcaggtgtcccagcgactgccacggccagggccgctgcgtggacggccggtgcgcctgc
cacgagggcttcgcgggccccgactgcgcgcagcgctcctgccccagtgactgtcacggc
ctggggcagtgtgtgtccggccgctgcatctgccaggagggctatgccggggaggactgc
tccgaggtgtctcctcccaaagaccttatagtgaccgaagtgaccgaggaaactgtaaac
ctggcctgggacaatgagatgcgggtcaccgaataccttatcatgtacacgcctacccat
gcggatggcctggaaatgcagttccgtgtgcctggggaccagacatctaccaccatccgg
gagctggagcccggtgtggagtatttcatccgtgtgtttgccatcctggagaacaagagg
agcatccctgtcagtgccagggtggccacttacttgcctgcacctgaaggcctaaaattc
aagtccatcaaggagacatcagtggaagttgagtgggatcctctagacattgcttttgaa
acatgggagatcatcttccggaatatgaataaagaagacgagggagagatcaccaaaagc
ctacgaaggccagagacttcttaccggcaaactggtcttgcccctgggcaagagtatgag
atatctttgcacattgtgaagaacaacaccaggggtcctggcttgaggagggtgacgaca
acccgcctggacgctcccagccagcttgaggtgaaagacatcacagacaccacagctcta
gtcacctggttcaagcccctggctgagattgacagcatcgagctctcctatggtgccaaa
gatatgcccggtgaccgcactaccattgaccttacacatgacgagaaccagtattccatc
ggaaacctaaagcctgacacagaatacgaggtgtcccttgtctcccgcagggtagacatg
tccagcaacccagccaaagagaccttcacaacaggcctggatgctccccggaatctccga
cgcgtctcccagacagacaacagtatcaccttggaatggaggaatgtcaaggcagccatt
gacaactacagaattaagtatgcacccatctctggaggtgaccatgcagaagttgatgtc
ccaaagagtcaacaagccacaaccaaaaccacactcatgggtctgaggccaggaactgaa
tatgggattggcgtttctgctgtgaaggaggacaaggagagcaatccagcaaccatcaat
gcagctacagacatggatgcacccaaggacctccaggtttccgaaacaacagagaacagc
ctgaccctgctctggagggcaccactggccaagttcgaccgttaccgcctcaactacagc
ctatctacaggccagtcaggagaggcccagctgccgaaggacaccacatcctatgtccta
acagggttgcaaccagcgcaggaatacaccattgtcctcacagccgagaagggcaggcac
aagagcaagccggcacatgtgaaggcatccactgagcaaatccctgagctggaaaatctc
accgtgactgaggttggctgggatggcctcacactcaactggaccgcagctgaccaggcc
tatgagcactttgtcattcaggtgcaggaggccaacaaggtggaggccactcagaacctc
acggtgcctggcagcctccgggctgtggacatcccaggcctcaaggcttccactccttac
agagtgtccatctatggggtgatccggggccataggacacccatactctctgttgaggcc
tccacaggggaaactcccacattgggagaggtcatggtggccaagttgggctgggatgcc
ctaacactcaactggacagctgcagaagggatctatgagcactttctcattcaggtgcaa
gaggctgatgtgttagaggtagcccagaaccgcacagttccgggaggactgaggtccaca
gacctgcctgggctcaaagctacgactcgctacagagtcaccatccgcggggtcactcag
gacttcagcacagcccctctctctgttgaggtcttgacagaggaggttccaggtctggga
aacctcacagtgaccaagcggggctggagcgccctcaggctggactggaccacaccagat
gagacctatgaccagtttatcattcaggtccggggcgctgaccaggtggaggaggctcac
aatctcaccgttcctggcagcctgcgctcagtggaaatcccaggcctcagggctggcagt
ccctacacaatcactctgcatggagtgatcaggggccacagcactcaacctcttgtcttg
gaggtcatcacagaggatctcccccaactgggagacttagctgtgactgaggttggctgg
gatggcctcacactcaactggaccgcagctgaccaggcctatgagcactttgtcattcag
gtgcaggaggccaacaaagtggaggccactcagaacctcacggtggctggcagcctccgg
gctgtggacatcccaggcctcaaggcttccactccttacagagtgtccatctatggggtg
atccggggccataggacacccgtgctctctactgaggcctccacagtcaaagagcctgat
attggaaacttaaatgtttccgacgtaactcctgagagcttcaatctctcctggacagcg
actgatgaaatcttcgagacttttaccattgaaattattgattccaataggttgctgcag
atggtagaatataatatatctggtgctgaacgaactgctcacatctcagggctcccccct
agtactgatttcattatctacctctctgggcttgctcacagcctccggaccaaaaccatc
agtgccacagtcactacagaagcagaaccggaagttgacaaccttctagtttcagatgcc
accccggacggtttccgtctgtcttggacagctgatgaaggaatattcgacagttttgta
ctcaaaatcagagatacaaaaaagcagtctgaaccactggaaataaccctcccttcccct
gaacgtaccagggatgtgacagggctcagagaagccactgaatacgaaatcgaactctat
ggaataagcaaaggaaggcaatcccaaccagtcagtgccatagcaacaacagccatgggc
cctccaaaggaaatcacattcacagacatcactgaaaattcagccacagtcagctggacg
gcacccactgcccaggtggaaaacttccggatcacctatgtgcccgtgacaggaggtgac
ccctccattgtgacagtggatggaagcaaaactgagacgcggctggtgaagctcacgcca
gggatggagtaccacgtcagtgtcatcgccatgaagggcttcgaggaaagcgacccagtc
tcagggtcactcaccacagctctggatggcccatctggcctggtaacagccaacatcact
gactcggaagccttggccatgtggcagccagccattgccaccgtggacagctatgtcatc
tcctacacaggggaaagagtgccagaaatcacgcgcacggtgtccgggaacacagtagag
tatgctctggctgaccttgagcctgccacagaatatacactgagaatctttgcggaaaaa
gggccccagaagagcctcaccatcactaccaagttcaccacagacctcgattctccaaga
gacttgactgctactgacattcagtcagaaactgccctcctcacctggcgacctcctcgg
gcatcggtcactggttacctcctagtctacgaatccgtggatggtaccaccaaggaagtc
attgtggggccagacaccacctcctatagcctggcagacctgagcccatctacccactac
acagcccggatccaggcactgagtggatctctgaggagcaagctgattgagaccatcttt
accacaattggactcctgtatccgttccccagggactgctcccaagccatgctgaatgga
gacacaacctctggcctctacaccatttatctgaatggtaacaagtcccagtcactggaa
gtgtattgtgacatgacttctgatggaggtggatggattgtatttctgagacgcaaaaat
ggacgggaagacttctatcgcaactggaaggcatatgctgctggatttggggaccgcaga
gaagaattctggcttgggctggataacctgagtaaaatcacggcccaaggacagtacgag
ctgcgtgtggacctgcaagaccatggagatacagcctatgctgtctacgacaggttcagc
gtgggagatgccaagacgcgttataagctgaaagtggagggctacagcgggacagcaggg
gactccatggcctaccacaatggcagatccttctcaacctttgacaaggacacagactct
gccatcaccaactgtgccttgtcctacaaaggagctttctggtataagaactgtcatcgt
gtcaacctgatgggaagatacggagacaacaaccacagtcagggtgttaactggttccac
tggaaggggcacgaatactcaatccagtttgctgagatgaagctgagacccagcaacttc
cgaaatcttgaaggcaggcgcaaacgggcataa
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integrated database retrieval system
