Dipodomys spectabilis (banner-tailed kangaroo rat): 122107347
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Entry
122107347 CDS
T07891
Symbol
Cul3
Name
(RefSeq) cullin-3 isoform X1
KO
K03869
cullin 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
dsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122107347 (Cul3)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122107347 (Cul3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122107347 (Cul3)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122107347 (Cul3)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
122107347 (Cul3)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122107347 (Cul3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
Stu2_CTS
DUF6655
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
122107347
NCBI-ProteinID:
XP_042534927
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRN
AYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIR
DILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDR
GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEAR
INEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMY
KLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESF
NNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFR
FMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSIS
NTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYL
AKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMT
ILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFT
VNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHN
VLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctgagcaaaggcacgggcagccggaaggacaccaagatgcggatccgggcc
tttccgatgaccatggatgaaaaatacgtaaacagcatttgggaccttctgaaaaatgca
attcaagaaatccagcgtaagaataacagtggtcttagttttgaggagctatatagaaat
gcatatacaatggttttgcataaacatggagaaaagctctacactggactaagagaagtt
gttaccgaacatctcataaataaggtgcgagaagatgtactaaattcattgaataacaac
tttcttcaaacactaaatcaagcttggaatgatcatcaaacagctatggtgatgattaga
gacatcttaatgtatatggaccgtgtatatgtacaacaaaataatgtggagaatgtctac
aatttgggattaattatttttcgagatcaagttgtgcgttatgggtgtattagagaccat
cttcgacaaactctattggatatgattgctagagagcgaaaaggagaagtcgtagacagg
ggcgcaataagaaatgcttgccagatgttaatgattttaggtcttgaaggaagatcagtc
tatgaagaagattttgaggctccttttttggaaatgtctgcagaatttttccagatggaa
agccagaaatttttagcagaaaacagtgcttcagtatatataaagaaagtagaagctaga
attaatgaagaaatagaacgggtaatgcactgccttgacaaatcaactgaagagcccatt
gtaaaggtggtggagagggaactcatttctaagcacatgaagactatagtagaaatggag
aactctggtctagtacatatgttgaaaaatggaaagacagaagaccttgcttgcatgtac
aagttatttagtcgtgtgccaaatggtttgaagacaatgtgtgaatgtatgagttcctat
ttgagagagcaaggtaaagcccttgtttctgaagaaggagaaggaaaaaatcctgttgac
tatatccagggtttattggatctgaagagtaggtttgatcgctttctccaggaatcgttc
aataatgaccggctctttaaacagactattgctggtgactttgagtattttctcaacctc
aactccaggtctcctgaatacctctcattatttattgatgataagctgaaaaagggagtc
aaagggctaacagaacaagaagtagaaactatattggataaggcaatggtcctttttagg
tttatgcaagaaaaagatgtatttgaacgttattataaacaacacctggcaagaagactt
ctcacaaataaaagtgtttcagatgactctgagaagaacatgatatccaaattaaagact
gaatgtggatgtcaattcacatcaaaactggaaggaatgtttagggatatgagcatctca
aacacaactatggatgaattcaggcaacatctacaggcaactggggtatctttaggtggt
gttgatcttacagtacgggttctcacaacaggatactggcccactcagtcagccacacca
aagtgcaacatcccaccagcaccaagacatgcttttgagatatttagaaggttctactta
gccaaacacagtggtcgacagctcacactccagcatcatatgggttctgccgatcttaat
gccaccttttatggtccagttaaaaaggaagatggatctgaagttggtgttggaggtgca
caagttactggctctaatacacggaagcacatattgcaagtctccactttccagatgacc
atattaatgctctttaataatagagaaaaatacacatttgaggaaattcaacaggagaca
gatatccctgaaagagagcttgttagagccctacaatccctcgcatgtggcaaaccaacc
cagcgggttcttacgaaagaacccaagtccaaggaaatagaaaatggtcatatattcaca
gttaatgatcagttcacatccaaactacacagagtcaagattcaaacagttgctgccaaa
caaggtgaatctgacccagaaaggaaagaaacgaggcagaaagtagatgatgacagaaag
catgagatagaagctgctatagtgaggataatgaaatctagaaagaagatgcaacacaat
gtgttagtagcagaggtaactcagcagttaaaggctcgattcttaccaagtccagttgtt
attaagaaacgtattgaaggacttattgagagagaatatttggcacgaacacctgaggat
cgcaaagtatacacatacgtagcataa
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