KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122107407
Entry
122107407         CDS       T07891                                 
Symbol
Nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
  KO
K10980  non-homologous end-joining factor 1
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    122107407 (Nhej1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122107407 (Nhej1)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     122107407 (Nhej1)
SSDB
Motif
Pfam: XLF XLF_CC XRCC4 IMUP
Other DBs
NCBI-GeneID: 122107407
NCBI-ProteinID: XP_042535037
LinkDB
Position
Unknown
AA seq 301 aa
MDELEQGLLMQPWAWLQLAENSLLAKAYITKNGYALLVSDLQQVWHEQVDCSVVSQRAKE
LNKRLTAPPAAFLCHLDNLLRPLLKADTHPGEATFSCDRVAEALILRVRSELSGLPFYWH
FHCVQASPSLVSQHLIRPLMGMSLALQGHVRELTALLRMKDLEIQEYQESGATLSRGRLK
TEPFEENSFLEQFMVEKLPEACSLGDGKPFVTNLQSLYVAVTKQEVQAAQKLQRTVSGET
QISSSTSPQGTDSQLLNQPEQPVSAAPALLAPEHQAMSASDSVQKPQLSKLKRKKPRGLF
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatgagctggagcaaggcctgttgatgcaaccatgggcatggctacagcttgctgag
aactctctcttagccaaggcttatatcacaaagaacggctatgccttgctggtttcagat
cttcaacaggtgtggcatgagcaggtggactgtagtgtggtcagccagcgagccaaggag
ctgaacaagcgcctgactgctcccccggcagcttttctctgtcatttggataatcttctt
cgtccattgttgaaagctgatactcaccctggtgaagctaccttctcctgtgatcgtgta
gcagaggcactgattttgcgggttcggagtgaactctctggtcttcccttctattggcat
ttccactgtgttcaggctagtccttccttggtctcccaacatttgattcgtcctctgatg
ggcatgagtctggcattgcagggccacgtgagggagctaacagcattgcttcgaatgaaa
gacttagagatccaggagtaccaggagagtggggctacactgagccgaggccgattgaag
actgagccatttgaagaaaattctttcttggaacaatttatggtagagaaattaccagag
gcatgtagccttggtgatggaaagccatttgtcacgaatcttcagagtttgtatgtagca
gtcaccaagcaagaggtccaagcagcacagaagcttcaacgcactgtttcaggagaaact
cagatctcaagcagcacctcccctcaaggaactgatagccaacttctgaaccagccagaa
cagccggtctctgcagctccagcccttctagcacctgaacaccaggccatgagtgcttca
gactctgtacagaaacctcagctgtcaaaactcaaaaggaagaagccaagggggctcttc
agttaa

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