Dipodomys spectabilis (banner-tailed kangaroo rat): 122107451
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Entry
122107451 CDS
T07891
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122107451 (Smarcal1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122107451 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
122107451
NCBI-ProteinID:
XP_042535113
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MSLPLTEEQKKKIEENRQKALARRAEKLLAGQPPSQGSGSSIATNPSRPKQGPSQNLRRE
PSKPVGHGVTVKQQNLSNSFHDDQRLHNSHHFQPSTSNQAERTWKSQEERSVACPSRSPP
SQTILSRLSPPLAQSPPNVLNQQLLGYKLGQSHTQASDKIRSTPVANITHEPLAKAKNSQ
ETPASSSGPLPRDPEFEVKTVKPSTSGGQSIFDTHNNSGGVTSKIKGKFQEKLRASVQNP
VSCQKGVCIKNGDRFMVKIGYNKELIAVFKSLPSRSYDPDTKTWDFSLTDYNALMEAAKH
LPTVTLQPLEEVDVSSQRQTNLPLAPSLAFVKGRCILISRARFEVDIGYSEELIGLFKQM
DSRQYDVKTRKWSFLLEEYNKLIAEVRCLPQVQLEPLPKTVTLAFASQLEKTSLHLTADI
PEADLSGVDAKLVCNLMPFQRVGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYRKEWP
LLVVVPSSVRFTWEQAFLRWLPSLNPEDINVVVTGKGRLTAGLVNIISFDLLSKLEKQLK
TSFKVVIIDESHFLKNSKTARCRAAVPILKVAKRVILLSGTPAMSRPSELYTQIVAVKPT
FFPQFHAFGLRYCDAKRLSWGWDYSGSSNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRK
MVVVAPGQISARARAALDAAAKEMTTDKTKQQQKEALIVFFNRTAEAKVPCVIEYILDLL
ESGREKFLVFAHHKVVLDAVTNELERKPLAPQHCSRPEFPLSLQHVQHIRIDGSTPSADR
EKLCQRFQLSEGHSVAVLSITAANMGLTFSSADLVLFAELFWNPGVLIQAEDRVHRIGQT
SSVGIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETNFSEVTEATDYFHKDPKQQTIYE
LFQKSFEEDGSDLELLEAAESFDPGSTSTTSGSGSLGDTLDENTLAASPPKKGKFEFFDN
WDSFTSPF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcctcttactgaggaacagaagaagaagattgaagagaatcgacagaaggct
cttgctcgtagggctgagaagttattagcaggacagcctccaagccaaggctctggatcc
tccattgctaccaacccttctcggcccaagcagggcccttctcagaatctccggagggag
ccttctaagccagtgggccatggtgtcactgttaaacaacagaatctcagcaactcattt
catgatgaccaaagacttcataattcccaccattttcagcccagcacatcaaaccaggct
gagaggacatggaagagccaagaagagagatccgtagcctgtcctagccgcagcccacca
agtcaaacaattcttagtaggctctctccccccttggcacaaagtcctcccaacgtcctt
aaccaacagctcttgggctataagttaggtcaaagtcatactcaggcttcagataaaatc
agatcaacacctgtggctaatataactcatgagcctttggccaaagcaaagaattcccag
gaaactcctgcttcttcctctggaccacttcctcgagatcctgaatttgaggtcaagact
gtgaaaccgtccacatctggtgggcagagcatttttgacactcataataactcagggggt
gtgacgtccaagataaaaggaaaatttcaagagaaattgagagcctcagtccaaaaccca
gtaagttgtcagaagggggtatgcatcaagaatggagatcgcttcatggtgaagattggc
tacaacaaggaactcattgcagtgtttaagagtctgcccagcagaagttatgatccagat
acgaaaacatgggatttcagcctgacagactacaatgccctgatggaagcagctaaacat
ctccccacagtcacactccagccattggaagaggttgatgtcagcagtcaaagacagacc
aatttgcctttagctccatccctggcctttgtcaaaggaagatgcatactcatttcccgg
gcccgcttcgaggtagacatcggctattcagaggaactcattgggctgtttaagcagatg
gattccagacagtatgatgtcaagaccaggaagtggagctttctcttggaagagtacaat
aaactaattgcggaggtgcgctgcctcccacaggttcagctggagcctctgcccaagact
gtcaccctggcatttgcttctcagctggagaagacatctctccatctcacagcagacatc
cccgaggccgacctttctggagtggatgccaagctcgtgtgtaatctgatgccctttcag
agagttggagttaattttgctatagccaaaagaggccgcctgctgcttgctgatgacatg
ggcctagggaagaccatccaagctatctgcatagcggccttttaccggaaggagtggccg
cttcttgtggtggtgccttcctctgtgcgcttcacctgggagcaggccttccttcggtgg
ctgccatctctgaacccagaggatatcaatgtggtggtgaccggaaagggtcgcctgaca
gccggcttggtcaacattatcagttttgaccttcttagcaagttggaaaaacagctgaaa
acctctttcaaagttgttattattgatgaatcgcacttcctcaaaaatagcaagaccgca
cgctgtcgagcagctgttcccatcctaaaggttgccaagagagtgatcttactatcaggc
acgccagccatgtcccggccctcagagctctacacgcagatcgtcgctgtcaagccgaca
ttcttccctcagtttcatgcctttggacttcgctactgtgatgccaaacggctatcctgg
ggctgggactactcgggctcctccaacctgggagagctgaagctcctgctggaggaagcc
atcatgctgcgccgcctcaaatctgacgtcctttcccaactgcctgccaaacagcgcaag
atggtagtagttgccccaggacagatcagcgccagggccagggctgccctggatgcagca
gccaaggaaatgaccactgacaaaactaaacagcagcagaaagaagccctcattgtcttc
ttcaacagaactgctgaagccaaagtcccatgtgtcattgaatatatcttagaccttctg
gaaagtggaagagagaagtttctagtgtttgcacatcataaggtggttctggatgcagtt
acaaatgaacttgagagaaagcctctggcaccacagcattgcagccggcctgagtttccc
ctgtccctgcagcacgtacagcacatccgcatcgatggctccacaccctcagccgaccga
gaaaagctgtgccagcggttccagctgtctgagggacactcagtggcagtgctgtctatc
actgccgccaacatgggcctcactttctcctcagctgacctagtgctgtttgccgagctc
ttttggaacccaggggtgctgatccaggccgaggaccgagtgcaccgcattggacagaca
agctccgtgggcattcactacctggttgcaaaaggcacagcggatgactacctttggccc
ttgattcaagagaagattaaagttctaggagaagctggcctttccgagaccaatttctca
gaagtgacagaagccactgattacttccacaaggacccgaagcagcagacaatctatgag
ttattccagaagtcatttgaggaagatggaagtgacttagagctcctggaggccgcagag
tcctttgacccaggaagtacttcaacaacctctggaagtggttctctgggagatactctg
gatgaaaacacattggcagccagtccaccaaagaaagggaaatttgaattttttgataac
tgggacagctttacttctcctttctaa
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