Dipodomys spectabilis (banner-tailed kangaroo rat): 122107459
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Entry
122107459 CDS
T07891
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122107459 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122107459 (Xrcc5)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
122107459 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Phage_int_SAM_5
VWA
Motif
Other DBs
NCBI-GeneID:
122107459
NCBI-ProteinID:
XP_042535135
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All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MERMGSKAAVVLCMDVGFTMNNSFPGKETPFEQAKKVMTMFIQRQVFSESKDEIALVLFG
TDGTENSLARGDQYQNITVHRHLMLPDFDLLEDIENKIQPGSQQADFLDALIVCMDVIQR
ETVGKKFEKRHIEVFTDLSSPFSKDQVDIIIQNLKKSGISLQFFLPFSIGKKDGTGDRGD
GNFSLDHSEPSFPLKGFTKQQKEGIQMVEKMMMSLEGEDGLEEIYSFSESLRQLNAFKKI
ERRSMPWPCQLTIGSNLSIRIVAYKSIIQTKVRKTWIIVDARTLKKEDVRRETVYCLNDD
DETEVSKEDTIQGFRYGSDIVPFSKVDEEQMKYKSDGKCFSVLGFCKSSQVERRLFMGNQ
VLKVFAAKGDEAAAVALSSLIHALDELDMVAIIRYAYGKKTNPQVGVAFPLIKEAYECLV
YVQLPFMEDLRQYMFSSLKNNKKFTPSEAQLSAIDELIDSMSLIKKDEEEDTIEDLFQTT
KIPNPEFQRLFQCLLHRALHPQEPLPPIQQHLLNMLDPPTEVRAKCQSSFSKIKTLFPLT
EAIKKKDQITAQDIFQDNHEEEPSAKKSKTEEGEANFSVSSLAEGTVTKVGSVNPAGNFR
ALVRQKNVSFEEVSHQLINHIEQFLETNETPYFMKSMDCIKAFREEAIQFSEEQRFNTFL
KALREKVEVKKLSHFWEIVVQDGITLISKDEASGSSITAEEAKQFLAPKEKPNEDVAAAF
EEGGDVDDLLDMI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatggggagtaaggcagctgttgtgctgtgtatggacgtgggctttactatg
aataactcctttcctggtaaagagaccccatttgaacaagcaaagaaggtgatgaccatg
tttatccagcgacaggtgttttctgagagcaaggatgagattgccttagtcctgtttggt
acagatggcactgagaatagccttgctagaggggaccagtatcaaaacatcacagtgcac
agacacctgatgctaccagattttgacttgctggaggacattgaaaacaaaatccaacca
ggttctcaacaagctgactttctggatgccctcatcgtgtgcatggatgtgattcagcgt
gaaactgtaggaaagaagtttgagaagaggcatattgaagtgttcactgacctgagcagt
ccgttcagcaaagaccaagtggatattataattcaaaacctgaagaaatctggcatttct
ctgcaattctttttgcctttctccatcggcaagaaagatggaactggagacagaggagat
ggcaacttcagcttggaccactctgaaccgtcctttcctctaaaaggatttactaagcag
caaaaagaaggtattcagatggtagaaaagatgatgatgtctttagaaggtgaagatgga
ctggaagaaatttattccttcagtgagagcctgcgacaactgaatgcctttaagaaaatt
gagaggcgttccatgccctggccctgccaactgaccattggctccaatttgtctataagg
attgtggcttataaatcgattatacagacaaaagttagaaagacttggataattgtggat
gcaagaacccttaagaaagaagatgtacgaagagaaacagtttattgcttaaatgatgat
gatgaaacagaagtttccaaagaggatactattcaagggttccgctatggaagtgatata
gttcctttctctaaagtggatgaggaacaaatgaaatataaatcagatggaaagtgcttc
tctgttttgggattttgtaaatcttctcaggtcgagaggagattgtttatgggaaatcaa
gttttaaaggtttttgcagcaaaaggtgatgaggcagcagcagttgcactctcctccttg
attcatgctttggatgaattagacatggttgccataattcgatatgcttatggcaaaaaa
actaaccctcaagttggtgtggcttttcctctcatcaaagaagcttatgagtgtttagtg
tatgtgcagctgcctttcatggaagacttgcggcagtacatgttttcatcactgaaaaat
aataagaaattcactccctcggaggcacaattgagtgccattgatgagctaattgactcc
atgagcttgattaagaaagatgaagaagaagacactattgaagatttgtttcaaaccacc
aaaatcccaaatcctgaatttcagaggttattccagtgtctgctgcacagagctttacat
ccccaggagcctctgcccccaattcagcagcatcttttgaatatgctggaccctcccact
gaagtgagagcaaaatgtcagagttctttttctaaaataaagactcttttccctctcact
gaagccatcaagaaaaaggatcaaataactgcccaggatattttccaagacaatcatgaa
gaagagccatctgctaaaaaatctaaaactgaggaaggggaagccaactttagtgtttct
agcctggccgaaggcactgtcactaaggttggaagtgtaaatcctgctggaaactttcgt
gctctagtgagacagaagaatgtcagctttgaggaagtaagtcaccagctaataaatcac
attgaacaatttttggagacaaatgaaacaccatattttatgaagagcatggattgcatc
aaagctttccgagaagaagctattcagttttcagaagagcagcgcttcaacactttcctg
aaagcccttcgagaaaaagtggaagttaaaaaattaagtcatttctgggaaattgtggtt
caggatggaattacactgatctccaaagatgaagcctctggaagctccatcacagctgaa
gaagccaaacagtttctggcccccaaagaaaagccaaatgaagatgtggcagctgcattt
gaagaaggtggtgatgtggatgatttactggacatgatatag
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