Dipodomys spectabilis (banner-tailed kangaroo rat): 122107516
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Entry
122107516 CDS
T07891
Symbol
Fn1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04810
Regulation of actin cytoskeleton
dsp04820
Cytoskeleton in muscle cells
dsp04933
AGE-RAGE signaling pathway in diabetic complications
dsp05100
Bacterial invasion of epithelial cells
dsp05135
Yersinia infection
dsp05146
Amoebiasis
dsp05165
Human papillomavirus infection
dsp05200
Pathways in cancer
dsp05205
Proteoglycans in cancer
dsp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122107516 (Fn1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122107516 (Fn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122107516 (Fn1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122107516 (Fn1)
04810 Regulation of actin cytoskeleton
122107516 (Fn1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122107516 (Fn1)
05205 Proteoglycans in cancer
122107516 (Fn1)
09162 Cancer: specific types
05222 Small cell lung cancer
122107516 (Fn1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122107516 (Fn1)
09171 Infectious disease: bacterial
05135 Yersinia infection
122107516 (Fn1)
05100 Bacterial invasion of epithelial cells
122107516 (Fn1)
09174 Infectious disease: parasitic
05146 Amoebiasis
122107516 (Fn1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122107516 (Fn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122107516 (Fn1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122107516 (Fn1)
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122107516 (Fn1)
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122107516 (Fn1)
Membrane trafficking [BR:
dsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122107516 (Fn1)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
122107516 (Fn1)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122107516 (Fn1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
122107516 (Fn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
Interfer-bind
NDNF
Big_10
Motif
Other DBs
NCBI-GeneID:
122107516
NCBI-ProteinID:
XP_042535224
LinkDB
All DBs
Position
Unknown
AA seq
2395 aa
AA seq
DB search
MPRGPGPRLPPPPPLLLLLAAALCLGTVVPAVGASRSKRQAQQIVQPQSPVPVSQSKPGC
YDNGKHYQINQQWERTYLGNALVCTCYGGSRGFNCESKPETEETCFDKYTGNTYRVGDTY
ERPKDSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGN
GKGEWTCKPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGNGRITCTSRNRCN
DQDTRTSYRIGDTWSKKDNRGNMLQCVCTGNGRGEWKCERHASLQTTSSGSGSFSDVRTA
IYQPQPQPQPGPYGHCASDSGVFYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYG
GNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRG
GNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDVDQKFGFCPMAAHEEICTT
NEGVMYRIGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFH
KRHEEGHMLNCTCFGQGRGRWKCDPIDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGR
GIGEWHCQPLQSYPGTSGPVQVIITETPSQPNSHPIQWNAPEPSHITKYILRWRPKTSTG
RWKEATIPGHLNSYTIKGLTPGVIYEGQLISIQQYGQREVTRFDFTTSPSTPVTSNTVTG
ETAPFSPVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEKGGEPQYLDLPSTAT
SVNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSR
PQAPITGYRIVYSPSLEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVF
IQQETTGVPRTDKVSPPRDLQFVEVTDVKVTIMWTPPESAVTGYRVDVLPVNLPGEHGQR
LPVSRNTFAEISGLTPGVTYYFKVFAVNQGRESKPLIAQQTTKLVAPTNLQFTNETDTTV
MVTWTPPRARIAGYRLTVGLTRGGQPKQYNVGPSASKYPLRNLQPGSEYTVSLVAVKSNQ
QSPKATGVFTTLQPVSSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTS
ETGSVMVSGLTPGVEYTYTVQVLRDGQERNIPPIVNTVVTPLSPPTNLHLETHPDTGVLV
VSWERSTTPDITGYRITTTPTDGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVYTVKD
DKESVPISDTIIPAVPPPTDLRFTNIGSDTMRVTWAPPPSIELTNLLVRYSPVKNEEDVA
ELSISPLDNAVVLTNLLPGTEYLVSVSSVYEQHESVPLRGREKTRLDSPTGIDFSEITTN
SFTVHWIAPRAPITGYKIRHHPEHFSGRPREDRVPPNRNSITLSNLIPGTEYVVSIVALY
GREESQPLVGQQPTVSDTPRDLEVIASTPTSLLISWEPPAVTVRYYRITYGETGGNSPVQ
EFTVPGSKSTATISNLKPGADYTITLYAIVGRGDSPASSKPVSIDYRTEIGKPSEMQVTD
VQDNSISVRWLPSSSPVTGYRVTTTPKNGQGPSKSKTVGPDETEMTIEGLQPTVEYVVSV
YAQNQNGESQPLVQTAVTNIDRPKGLTFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDG
IHELFPAPDGEEDTAELKGLRPGSEYTVSVVALHGDMESQPLIGTQSTAIPPPTNLKFTQ
VTPTSLSAQWTAPNIQLTGYRVRVTPKDKTGPMKEIHLSPDSSSVVISGLMVATKYEVSV
SALKDSLTSKPAQGIVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAIPTT
GQTPVQRIISPDVRSYTITGLQPGTDYKIHLYTLNDNARSSPVIIDASTAIDAPSNLHFL
TTTPNSVLLSWQPPRARITGYIIKYEKPGSPPREVVPRPRPGVTEATVTGLEPGTEYTFY
VIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEILDVPSTVQKTPFITTNPGYDTG
NGIQLPGTSHQQPSVGQQMIFEEHGFRRTTPPTAATPVRLRPQPYTPNVDEEIQIGHVPR
GDVDYHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCNPVGTDDEPLQFRVP
GTSSAATLTGLTRGTTYNIIVEAMKDQRRHKVREEVVTVGNSVNEGLNQPTDDSCFDPYT
VSNYAIGEEWERLSESGFKLTCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENG
QMMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQRGWRCD
NCRRPGAESSPEGTTGHSYNQYSQRYHQRTNTNVNCPIECFMPLDVQADREDSRE
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggggtccgggaccccggctgccgccgccgccgccgctgctgctgctgctggcc
gcggccctgtgcctgggcaccgtggtgcccgccgtcggagcctcgaggagcaagaggcag
gctcagcagatcgtgcagccccagtccccggtgcccgtcagtcaaagcaagcctggttgt
tatgacaacgggaaacactatcagataaaccaacagtgggaacgcacctacttgggcaat
gctttggtttgtacatgttatggaggaagccgaggctttaactgcgagagtaaacctgaa
actgaagagacttgctttgacaagtacactgggaacacttaccgcgtgggtgacacttat
gagcgccctaaagactccatgatctgggattgtacctgcatcggagctggacgagggagg
atcagctgcaccattgcaaatcgctgccatgaagggggccagtcctacaagattggtgac
acctggaggagaccacatgagaccggtggttacatgttagagtgtgtgtgtcttggtaat
gggaaaggagaatggacctgcaagcctatagctgagaaatgttttgatcatgctgctggg
acttcctatgtggttggggaaacgtgggaaaagccctaccaaggctggatgatggtggat
tgtacttgtctgggagaaggcaatggacgcatcacttgtacctctcgaaacagatgcaat
gatcaggacacacggacttcctatagaattggagacacttggagcaagaaggataatcga
gggaacatgctccagtgtgtctgcacaggcaatggcagaggggaatggaaatgtgagagg
catgcatctctgcagaccacatcatctggatctggctccttctcagatgtccggacagct
atttatcagccccagcctcagccccagccgggtccctacggccactgtgcatctgacagc
ggtgtcttctactctgtggggatgcagtggttgaagacccaaggaaataagcaaatgctg
tgtacttgcctgggcaatggagtcagctgccaggagacagctgtgactcagacttatggt
ggcaattcaaatggagagccctgcgtcctccccttcacctacaacggccgcaccttctac
tcctgcaccacagaagggcggcaggatggacatctgtggtgtagcacaacttcaaattat
gagcaggatcagaagtattctttctgtaccgaccatactgttttggtgcagactcgaggt
ggaaattccaatggtgccttgtgccactttcctttcctgtacaacaaccacaattatact
gattgtacttctgagggcaggagggataacatgaaatggtgtggaaccacacagaactat
gatgttgaccagaaatttggattctgtcccatggctgcccacgaggagatctgtacaacc
aacgagggagttatgtatcgcattggagatcagtgggataaacagcatgacatgggtcac
atgatgaggtgcacgtgtgttgggaatggtcgtggagagtggacgtgtgtcgcctactcc
cagctccgagatcagtgcattgttgatgacatcacgtacaatgtgaatgatacattccac
aagcgtcatgaagagggtcacatgttgaactgcacctgctttggccagggccggggcaga
tggaagtgtgatcccattgaccagtgtcaggattcagaaacccggacattttatcaaatc
ggagactcgtgggagaagtacgtgcacggcgtcagataccagtgctattgctatggccgg
ggcattggggagtggcattgccaacctctgcagtcctacccaggtacaagtggtcctgtc
caagtaattatcactgaaacccccagccagcccaactctcaccctatccagtggaatgca
ccagaaccatctcatatcactaagtacatcctcaggtggagacctaaaacgtctacgggc
cgttggaaggaagccaccatcccaggccacttaaactcgtacactatcaaaggcctgacc
ccaggtgtgatatacgaggggcagctcatcagcatccagcagtatggccagagagaggtg
acccgcttcgacttcaccacaagcccgagcacacctgtcaccagcaacactgtgacagga
gagacagcacccttttctcccgttgtggccacttctgagtcggtgactgaaatcacagcc
agcagctttgtggtctcatgggtctctgcttcggacaccgtgtcaggattccgagtggag
tatgagctgagtgaaaagggcggtgaaccacagtatcttgaccttccaagcacagccact
tctgtgaacatccctgacctgcttcctggccggaagtacattgtcaatgtctatcagata
tctgaagaaggaaaacagagtttgatcctgtcaacgtcgcagactacagcacctgatgcc
cctcctgaccctaccgtggaccaggttgatgatacttccattgttgttcgatggagcaga
ccccaggcacccatcaccggatacagaatcgtctactcaccatcactagaaggcagtagc
acagaactgaaccttcccgagactgccaattccgtgaccctcagtgatctgcagcctggt
gtgcagtataacatcaccatctatgctgtggaagaaaatcaagaaagcacacctgttttc
atccaacaagaaactactggtgtcccacgtacagataaagtgtcccctcccagggacctg
cagtttgtggaggtgacagatgtgaaggtcaccatcatgtggacgcctcctgagagtgcg
gtaactggctaccgtgtggatgtgctccctgtcaacttgcctggggagcatgggcaaagg
ctgcctgtcagcaggaacacgttcgcagaaatctccgggctgacccccggcgtcacttac
tacttcaaagtcttcgctgtgaaccaagggagagagagcaagcctctgatcgcacaacag
accaccaaactggttgctcccacgaatctccagtttaccaatgaaacagatacgactgtg
atggtgacctggactccacctcgggcccggatcgcaggctaccgactgaccgtgggcctg
acccgaggaggccagcctaagcagtacaacgtggggccctcggcttccaagtacccgctg
cggaatctgcagcctggctctgaatacaccgtcagcctagtagctgtgaaaagcaaccaa
caaagccccaaagccactggtgtctttaccactctgcagcctgtgtcttccattccgcct
tacaacacagaggtgactgagaccaccattgtcatcacatggacgcctgctccaagaatt
ggttttaagctgggtgtacgcccaagccaaggaggggaagcacctcgagaggtaacttca
gaaacaggaagcgtcatggtatctgggttgactccaggtgtggaatacacttataccgtc
caagtcctgagagacgggcaggaacggaacatcccgccaattgtgaacacagtagtgaca
ccattgtctcctccaacaaacttgcacttggagacacacccggacactggcgtgcttgta
gtctcctgggagagaagcactacaccagatattactggctatagaatcaccacaactcca
acagatgggcagcagggaacttctttggaagaagtggttcatgccgatcagagttcctgc
acttttgaaaacctgaatcctggcttggaatacaatgtcagtgtttatactgtcaaagat
gacaaggaaagtgttcctatctctgataccatcatcccagcggtccctcctcccactgac
ctgagattcaccaatatcggctcagacactatgcgtgtcacatgggctccacctccatcc
attgaactgactaacctcttggtacgctactcacccgtgaagaatgaagaagatgtggca
gagctgtccatttctcctttagacaatgcagtggtcttaacaaatctcctgcctggaact
gaatatttagtcagtgtctccagtgtctatgaacaacatgagagcgtccctctcagagga
agagagaaaacacgtcttgattccccaactggcattgacttttccgagatcactaccaac
tctttcacggtgcactggattgctcctcgagctcccatcactggttacaagattcgccac
catcctgaacactttagtgggagacctcgagaagatagagtgccccccaaccgcaattcc
atcaccctcagcaacctcattccaggcacggagtatgtggtcagcattgttgctctttat
ggccgagaggaaagccaacccttagttggccaacaaccaacagtttctgataccccaagg
gacttggaagtcattgcttcaactcctactagcctcctgatcagctgggagcctccagca
gtcaccgtgaggtactacaggatcacctatggagaaacaggaggaaatagccctgtccag
gagttcactgtgcctgggagcaagtccacagctaccatcagcaacctgaagcctggagca
gattataccatcaccttatatgctattgttggccgtggggacagcccagccagcagcaag
ccagtttccattgattatcgaacagaaattggcaaaccatctgagatgcaagtgacagat
gttcaagacaacagcattagtgtcaggtggctgccttcaagttctcctgtcactggctac
cgagtgactaccacacctaaaaatggccagggaccatccaaatcaaaaactgtgggtcca
gatgaaacagaaatgaccattgaaggcttacagcccactgtcgaatatgtggttagtgtc
tatgctcagaaccaaaatggagagagccagcccctggttcagactgcagtgaccaacatt
gatcgccctaaaggactgacattcactgatgtggatgttgattccatcaaaattgcttgg
gaaagcccacaggggcaagtttccaggtacagggtgacctactcgagccctgaggatgga
atccatgagctattccctgcacctgatggtgaagaagacactgcagagctgaaaggcctc
aggccgggttctgagtacacagtcagtgtggttgccttgcacggtgacatggagagccag
cccttgattggaacccagtccacagctattcctcctccaaccaacctgaagttcactcag
gtcacacccacaagcctgagtgcccagtggacagcacccaatattcagctcactggatac
cgagtgcgtgtgacccccaaggacaagacgggccccatgaaggagatccacctttctcct
gatagctcttccgtggttatatcagggctcatggtggccaccaaatatgaagtgagtgtt
tctgctcttaaggactcattgacaagcaaaccagcccagggaattgtcaccactctggaa
aatgttagccctccaagaagagcccgcgtgacggatgctacagaaaccacaatcaccatt
agctggcgaaccaagactgagaccattacaggcttccaagttgatgccatcccaacgact
ggccagaccccagttcagagaatcatcagcccagatgtcaggagctataccatcacaggt
ttacaaccaggcactgactacaagatccacctgtacaccctgaatgacaatgcccggagc
tcccctgtgatcattgatgcctctactgccattgatgcaccatccaacctgcacttcctg
accaccacacccaactctgtgctgttatcatggcagccaccccgtgccagaattactggc
tacattatcaagtatgagaagcctgggtcccctcccagagaagtcgtccctcggccccgc
ccaggtgtcacagaggccaccgttactggcttggaaccaggaactgagtacacgttctat
gtcattgccctgaagaacaaccagaagagtgagcctctgattggaaggaaaaagacagat
gagcttccccaactggtaacccttccacaccccaatcttcacggaccagaaatcttggat
gttccctccacagttcaaaagacccctttcatcaccaccaatcctgggtatgacaccgga
aatggtattcagcttcctggcacatcccatcagcagcccagtgttgggcaacaaatgatc
tttgaggaacatggttttaggcggaccacaccacctaccgcggccaccccagtaaggctc
aggccacaaccatacacaccgaacgtagatgaggagatccaaattggtcacgtccccagg
ggagacgtagactaccacctctatcctcacgttctgggactcaatccaaatgcctctaca
ggacaagaagcgctctctcagacaaccatctcttggaccccattccaggaaagctctgag
tacatcatttcatgtaatcctgttggcaccgatgatgaacccttacagttccgagttcct
ggcacttcttccgctgccactctgacaggcctgaccagggggaccacctacaatatcata
gtggaggccatgaaagaccagaggaggcacaaagtgcgggaggaggttgttacagtgggc
aactctgtcaatgaaggcctgaaccaacccaccgatgactcatgctttgacccctacaca
gtttccaattatgccattggagaggaatgggagcggttgtctgaatctggctttaagctc
acgtgccagtgcttaggctttggcagtggtcatttcagatgcgattcatctaaatggtgc
catgacaatggtgtgaactacaagattggagagaagtgggatcggcagggcgaaaacggc
cagatgatgagctgcacgtgtcttgggaatggaaaaggagaattcaagtgtgatcctcat
gaagctacatgctatgacgatgggaagacataccatgtaggcgaacagtggcagaaggaa
tacctgggggccatttgctcctgcacatgcttcggaggccagcggggctggcgctgtgac
aactgccgcagaccgggggctgagtccagtcctgagggcaccactggccactcctacaac
cagtattcacagagataccaccagagaacgaacactaatgttaattgtccaattgagtgc
ttcatgccgttagatgtccaggctgacagagaagattccagagagtaa
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integrated database retrieval system
