Dipodomys spectabilis (banner-tailed kangaroo rat): 122107639
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Entry
122107639 CDS
T07891
Symbol
Lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122107639 (Lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122107639 (Lsm1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122107639 (Lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
122107639 (Lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122107639
NCBI-ProteinID:
XP_042535375
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcaccgccagcctcatcgaggacatagacaaaaaacacttggtc
ctgcttcgagatggaaggacacttataggatttttaagaagcattgatcagtttgctaac
ttagtgcttcatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgatacacctctgcaacaagtatctattgaagagatcctagaagaacaaagg
gtagaacagcaaaccaaattggaggctgagaagctgaaagttcaggcccttaaagatcgg
ggtctttctattccccgagcagatactcttgatgagtattaa
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integrated database retrieval system
