Dipodomys spectabilis (banner-tailed kangaroo rat): 122107784
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Entry
122107784 CDS
T07891
Symbol
Ptch2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04340
Hedgehog signaling pathway
dsp05200
Pathways in cancer
dsp05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122107784 (Ptch2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122107784 (Ptch2)
09162 Cancer: specific types
05217 Basal cell carcinoma
122107784 (Ptch2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
122107784
NCBI-ProteinID:
XP_042535542
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MARPPPLEELPRCCHTPPIRSVAPQILAGSLKAPLWLRAYFQGLLFSLGCRIQRHCGKVL
FLGLLAFGALALGLRVAVIETDLEQLWVEVGSRVSQELRYTKEKLGEEAAYTSQMLIQTA
RQEGENILTPEALGLHLHAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEK
LFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLD
KAQVGQAYVGRPCLDPTDTHCPPSAPNHLSRQAPNVAQELNGGCHGFSHKFMHWQEELLL
GGMARDLQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEDQASTVLQAWQRRF
VQLAQEALPENASQQIHAFSSATLDDILHTFSEVSAARVVGGYLLMLAYACVTMLRWDCA
QSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDIFLLAHAFT
EAPPGTPLQERMGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCSF
VAVMLVFPAVLSLDLRRRHCQRLDVLCCFSSPCSARMIQILPQDLGERTVPVGIAHLTTT
VQAFTHCEASSQHVVTILPPQDHLVPPPSDPLSSELFSPGGSTRDLLGQEEGTRQKAACK
SLPCARWNLAHFARYQFAPLLLQSQAKAMVLVFFGALLGLSLYGTTLVQDGLSLTDVVPR
GTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPR
TWLHYYRNWLQGIQAAFDQDWAAGRITRHSYRNGSEDGALAYKLLIQTGNAQEPLDFSQL
TTRRLVDEEGLIPPEFFYVGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLHI
PAAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACAEAGQAGVHAYPSGSPFLFWEQYLG
LRRCFLLAVCVLLVCTFLVCALLLLNPWMAGLIVLVLAMMTVELFGIMGFLGIKLSAIPV
VILVASVGIGVEFTVHVALGFLTTQGSRDLRATRALERTFAPVTDGAISTLLGLLMLAGS
NFDFIVRYFFLVLTVLTLLGLLHGLMLLPVLLSILGPPPEVVQMYKEGPRVLGLATPQGG
RLGWGASPTLHQNFARVTTSMTVALHPPPLPGAYIHPASDEPTWSPADSGSSNFGSRANH
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccacccctggaagaattgccccgatgctgccacacacctccaattcga
tccgttgcacctcagatcctagctgggagcctgaaagctccgctctggcttcgtgcttac
ttccagggcctgctcttctctctgggctgcaggatccagagacactgtggcaaagtgctc
ttcctgggactgttggcctttggggccctggcattgggtctccgtgtggctgttattgag
actgacctggaacaactctgggtagaagtgggcagccgggtaagccaggagctgcgttac
accaaggagaagctgggggaggaggctgcgtacacctcccagatgttgattcagactgca
cgccaggagggagagaacatcctcacgcctgaagcacttggcctccacctccacgcagcc
ctcactgccagtaaagtgcaagtgtcactctacggaaagtcctgggatctgaacaaaatc
tgctacaaatctggagttccccttattgaaaatggaatgattgagcggatgattgagaag
ctgtttccctgtgtgatcctcaccccacttgactgcttctgggagggagccaaactccaa
ggaggctccgcctacttgccgggtcggcctgacatccagtggaccaatctggatccagaa
cagctgctagaggagctaggcccctttgcctctctcgagggcttccgggaactgctagac
aaggcacaggtgggccaggcctatgtggggcggccctgcctggatcctactgatacccac
tgcccacctagtgcccccaaccatctcagcagacaggctcccaatgtggctcaggagctg
aatgggggctgccatggcttctcccacaaattcatgcactggcaggaggagttgctgttg
ggaggcatggccagagacctccaaggacagctgctgagggcagaggccctgcagagcacc
ttcttgctgatgagtccccgccagctgtatgagcacttccgtggtgactatcagacgcat
gacatcggctggagcgaggaccaggccagcactgtgctgcaggcctggcagcggcgcttc
gtacagctggcccaggaagcccttcctgagaatgcctcccaacagatccatgccttctcc
tctgccaccctggatgacatcctacacacgttctctgaagtcagtgctgcccgggtggta
ggaggctatctgctcatgctggcctatgcctgtgtgacaatgctacggtgggactgtgct
cagtcccagggtgcggtgggcctggctggggtgttgctggtggccctggcagtggcttca
ggccttgggctctgtgccctgcttggcatcaccttcaatgctgccactactcaggtacta
cccttcttggctctgggcattggagtggatgacatattcctgctggctcatgcattcacc
gaggctccacctggcacccctctccaggagcgcatgggcgagtgcctgcagcgcaccggc
accagtgttgcactcacatccatcaacaacatggtcgcctttttcatggctgccctggtt
cccatccctgccctgcgggccttctccctgcaggcagccatagtggttggctgtagcttt
gtagctgtgatgcttgtcttcccagcggtcctcagcctggatctgcgccgacgccactgc
cagcgccttgatgtgctctgctgcttctctagtccctgctctgctcgtatgattcagatt
ctcccccaggatctgggggagaggacagtaccagtgggcatcgcccacctgacaaccaca
gtgcaagcatttacacactgtgaagccagcagccagcatgtggtcaccattctgcctcct
caagaccacctggtgcccccaccttctgacccactgagctctgagcttttcagccctggg
gggtctacacgggaccttctgggccaagaggaggggacaaggcagaaggcagcctgcaag
tccctaccctgtgcccgctggaatcttgcccattttgcccgctatcagtttgctcccttg
ctgctccagtcacaagccaaggctatggtgctggtgttctttggggctcttctgggcctg
agcctctacggaaccaccttggtgcaggacgggctgtccctgacagatgtggtacctcga
ggcaccaaggaacatgccttcctgagtgcccagctcaggtacttctccctgtatgaggtg
gccctggtgacccagggtggctttgactacgcccactcccaacgtgccctctttgatctg
caccagcgcttcagttccctcaaggctgtgctgccccctcctgccacccaggcaccccgg
acctggctgcactattaccgcaactggctgcagggaatccaggctgcatttgaccaggac
tgggctgctgggcgtattacccgtcattcctaccgcaatggctcagaggatggggcactg
gcctacaagctgctcatccagactggaaatgcccaggagccgctggattttagccagctg
accacaagaaggctggtagatgaggaaggactgattccaccagagttcttctatgtgggg
ctgacagtgtgggtgagcagtgaccccctgggtctggcagcttcccaagccaacttctat
cccccacctccagaatggctacacgacaaatatgacaccactggggagaatcttcacatc
ccagcagcccaacccctggagtttgcccagttccccttcctgctgcatggcctccagaag
actgcagactttgtggaggccattgagggggcccgggcagcatgtgcggaggcaggccag
gcaggggtgcatgcctaccccagtggctcccccttcctcttctgggagcagtatctgggc
ctgcgacgctgcttcctgctggctgtctgcgtcctgctggtgtgtaccttcctcgtctgc
gccctgctgctgctcaacccatggatggctggcctcatagtgctggtcctggcgatgatg
actgtggagctctttgggatcatgggtttcctgggtatcaagctgagtgccatccccgtg
gtgatcctcgtggcctctgtgggcattggtgtcgagttcacagtccatgtggctctgggc
ttcctgaccacccagggtagccgggaccttcgggctacccgagcgctagagcgcacgttt
gcccctgtgaccgatggggctatctccacgttgctgggtctgctcatgcttgctggctcc
aactttgacttcattgtaaggtacttcttcctggtgctaacagtactcacactcttgggc
ctcctccatggactcatgctgctgcctgtgctgctttccattctgggccccccacctgag
gtggtacagatgtacaaggagggcccaagggtcctgggccttgcaactccacagggaggc
agacttgggtggggggcatcccccaccctccaccagaactttgccagagtgactacctcc
atgaccgtggctcttcacccaccccctctacctggtgcctacatccacccagcctctgat
gagcccacatggtccccagctgacagtggctctagcaacttcggttctagagccaaccac
tga
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