Dipodomys spectabilis (banner-tailed kangaroo rat): 122108099
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Entry
122108099 CDS
T07891
Symbol
Slc6a1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04082
Neuroactive ligand signaling
dsp04721
Synaptic vesicle cycle
dsp04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122108099 (Slc6a1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
122108099 (Slc6a1)
04721 Synaptic vesicle cycle
122108099 (Slc6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122108099 (Slc6a1)
Transporters [BR:
dsp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122108099 (Slc6a1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122108099
NCBI-ProteinID:
XP_042536008
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All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MAADGSKVADGQIATEVSEAPVASDKPKTLVVKVQKKTGDLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDHCFSNYSIA
NTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVV
YFSATYPYVMLIVLFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPSEDIVRPENGPEQPQAGSSASKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgacggcagcaaggtggccgacgggcagatcgccacagaggtcagcgaggcc
cccgtggccagcgacaaacctaagaccctggtggtgaaggtgcagaagaagaccggggat
ctccccgaccgggacacgtggaaaggccgcttcgacttcctcatgtcctgcgtgggctac
gccattggcctgggcaatgtctggaggttcccctatctctgcgggaagaatggtggaggg
gccttcctgatcccctacttcctgacgctcatcttcgcgggcgtcccgctgttcctgctc
gagtgctccctgggtcagtacacatccatcgggggcctgggtgtgtggaagctggccccc
atgttcaagggggtgggcctcgccgccgcggtgctgtccttctggctgaacatctactac
atcgtcatcatctcctgggccatctactacctgtacaactccttcaccaccacactgccg
tggaaacagtgcgacaatccctggaacacagaccactgcttctccaactacagcatcgcc
aacaccaccaacatgaccagtgccgtggtggagttctgggagcgaaacatgcaccagatg
actgacggactggataagcccggccagatccgctggccgctggccatcaccttggccatc
gcctggatcttggtgtatttctgcatctggaaaggagttggctggactggaaaggtggtc
tacttctccgccacgtacccctacgtcatgctcatcgtgctgttcttccgcggagtgacg
ctgcccggggccaaggagggcatcctcttctacatcacgcccaacttccgcaagctgtcg
gactcggaggtgtggctggacgcggccacccagatcttcttctcctacgggctgggcctc
gggtccctgatcgcgctggggagctacaactccttccacaacaatgtctacagggactcc
atcatcgtctgctgcatcaattcctgcacgagcatgtttgcaggattcgtcatcttctcc
attgtgggcttcatggcccatgtcaccaagagatccattgcagatgtggcagcttcaggc
cctgggctggccttcctagcctacccagaggcggtgacccagctgcccatctctcctctg
tgggccatcctgttcttctccatgctgctcatgttgggtatcgacagccagttctgcact
gtggaaggatttatcacagccctggtggatgagtaccccagactgcttcgtaaccgcagg
gagctcttcattgctgccgtctgcatcatctcctacctaattggcctctccaacatcact
caggggggcatctatgtcttcaaacttttcgactactactctgccagtggcatgagcctg
ctgttccttgtgttctttgagtgtgtttccatttcctggttttatggtgtcaaccgattc
tatgacaatatccaggagatggttggctccagaccctgcatctggtggaaactgtgctgg
tccttcttcacccccatcatcgtggcgggcgtgttcctcttcagcgccgtgcagatgacg
cctctcaccatgggaagctacgttttccccaagtggggccagggcgtgggctggctcatg
gccttgtcctccatggtcctcatccccggctacatggcctacatgttcctcaccctgaaa
ggctctctgaagcagcgcctccaggtcatgatccagcccagcgaagacattgtgcgcccc
gagaatggtcccgagcagccccaggcaggcagctcagccagcaaggaggcttatatctag
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