Dipodomys spectabilis (banner-tailed kangaroo rat): 122108186
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Entry
122108186 CDS
T07891
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122108186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122108186
03110 Chaperones and folding catalysts [BR:
dsp03110
]
122108186
04121 Ubiquitin system [BR:
dsp04121
]
122108186
Enzymes [BR:
dsp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122108186
Spliceosome [BR:
dsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122108186
Complex C
U4/U6.U5 tri-SnRNP related factors
122108186
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
122108186
Chaperones and folding catalysts [BR:
dsp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122108186
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
U-box type E3
122108186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
Motif
Other DBs
NCBI-GeneID:
122108186
NCBI-ProteinID:
XP_042536108
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFCGGKKPEIPRSNFRRLPFDHCSLSLQPFTHPVCTPEGII
FDLLSIYPWLTEYGINPSNGEKLDTKSLVILNFAKNSEGKYHCPVLFTVFTDNTHIVAIR
TTGNVYAYEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQDPTNLDKFNISNFFHVKNNMK
VTDSNKEKAKQDPSYYLKNTNAETRETLKELYKEFKGDEILAATMKPPEKKKVDQLNAAH
YSMGKVSASFTSTTIVPVTTQEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLT
PKTCENFIKLCRKHYYHGTIFHRSIKNFVIQGGDPTGTGTGGQSYWGKPFEDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTFMENIESDPQTD
CPKEEIRIHNTTVFVDPYEEADAQIAEEGKKTQLKEAPEIKVKTGQSQSGRQSPQTYRQG
VGKYINPAAIKRAAEEPSTSTAASETKKRPRRGFGDFSSW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcaccagaaggacaagatgtacatcacctgcgctgaatacactcac
ttctgtggtggcaagaagccagagatcccaaggtcaaatttccgtcgtctaccttttgac
cactgcagcctctctctacagcccttcacccacccagtctgcactccagaaggcatcatc
tttgacttgctgagtatttatccatggcttacagagtatgggatcaaccccagcaatgga
gagaaacttgatacaaaatccctggtcattctgaactttgccaaaaacagtgaagggaag
taccactgcccggtgctgttcaccgtgttcactgacaacacccacattgtggctattagg
acaactggcaatgtctatgcctatgaggcagtggaacagctgaacatcaaggccaagaac
ttccgggacctgctgactgatgagcccttctctcgccaggatatcatcactctccaggat
cccaccaatctggacaaatttaacatctccaacttctttcatgttaagaataacatgaaa
gtaacagactcaaataaggaaaaggccaagcaagacccatcttactatttgaaaaacaca
aatgctgagacccgagagaccctgaaggagctctacaaggaattcaaaggggatgagatc
ctagcagccaccatgaagcccccagagaagaaaaaagtggatcagctgaatgctgcccac
tattccatggggaaggtcagtgcttcctttacctccaccaccatagtgccagtgacaact
caagaagcagctgccatcgatgaagatgtgctgcgataccagtttgtgaagaagaagggc
tatgtacgactgcacaccaacaagggagatctcaacctggagttgcattgcgacctgaca
ccaaaaacctgtgagaacttcatcaagctctgcaggaagcactattaccatggcaccatc
tttcacaggtccatcaagaactttgtgatccaaggtggtgaccccacaggcactggcaca
ggggggcagtcgtactggggcaagcccttcgaagatgagttccgacccaacctctctcac
acaggccgtggcatcctcagtatggccaactcggggcccaacaccaacaagtctcagttc
tttatcacattccgctcctgtgcttacctggataagaagcataccatctttggacgggtt
gttgggggctttgatacactgactttcatggagaatatagaaagtgacccccaaactgac
tgtcctaaggaggagatccgtatccacaacactacagtgttcgtggacccatatgaggaa
gcagatgcccagattgccgaggaagggaagaagacacagctaaaagaagccccagagatc
aaggtcaagactggccaatcccaatctggtagacaaagcccccagacataccgtcagggg
gtgggcaagtacatcaacccagcagccataaaacgagcagcagaagagccatcaaccagt
acagctgcctctgagaccaagaaaaggcccagacggggttttggagacttcagctcctgg
tag
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integrated database retrieval system
