KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122108826
Entry
122108826         CDS       T07891                                 
Symbol
Sdc1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04512  ECM-receptor interaction
dsp04514  Cell adhesion molecules
dsp04820  Cytoskeleton in muscle cells
dsp05144  Malaria
dsp05205  Proteoglycans in cancer
dsp05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122108826 (Sdc1)
   04514 Cell adhesion molecules
    122108826 (Sdc1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122108826 (Sdc1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    122108826 (Sdc1)
  09174 Infectious disease: parasitic
   05144 Malaria
    122108826 (Sdc1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    122108826 (Sdc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsp04131]
    122108826 (Sdc1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:dsp04090]
    122108826 (Sdc1)
   00535 Proteoglycans [BR:dsp00535]
    122108826 (Sdc1)
Membrane trafficking [BR:dsp04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    122108826 (Sdc1)
CD molecules [BR:dsp04090]
 Proteins
  122108826 (Sdc1)
Proteoglycans [BR:dsp00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   122108826 (Sdc1)
SSDB
Motif
Pfam: Syndecan Romo1 Glycophorin_A
Other DBs
NCBI-GeneID: 122108826
NCBI-ProteinID: XP_042536771
LinkDB
Position
Unknown
AA seq 308 aa
MRRAALWLWLCALALRLQPAWPLTVATNVPPEDQDSSGDDSDNFSGSGAGALQDLTLSRP
SSSTWKDVWLLTVTPTSPEPISRGATAPSTSMVPAIERPEEGEAVVLSKVDSDFTVGEKV
VTTEPRETTQLLTTHRASTAKATTAQASATSPPHRDVQPDHHGTSAPVAPEEVDLPKVEE
GGPSATEKVVEDGATNQLPAGEGSGEQDFTFDTSGENTAVVAMEPGLRNQPPVEDGATGT
SQGLLDRKEVLGGVIAGGLVGLIFAICLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKP
TKQEEFYA
NT seq 927 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctgtggctgtggctgtgcgcgctggcgctgcgcctgcagccggcc
tggccgctgactgtggccactaatgtgcctcctgaagatcaggacagctctggagatgac
tctgacaacttctccggctcgggcgcaggtgccttgcaagatctcaccttgtcccgccca
tcttcctctacctggaaggatgtgtggcttctcacagtcacacccacgtctccagagccc
ataagcaggggtgccacagctccctcaacctccatggtgccggccatcgagaggcctgag
gagggagaggcagtggtacttagcaaagtggactctgactttactgtcggggagaaggtg
gtcaccactgagcccagggagaccacacagctcctgaccacccatcgagcctcaacagcc
aaagccaccacagcccaggcctccgccacctcccctccccacagagacgtgcagcctgac
caccatgggacctcagcacctgtagcacctgaggaagttgaccttcccaaagtggaggag
ggaggtccttctgctactgagaaggtggttgaggatggagccaccaatcagctcccagcg
ggagagggctctggggagcaggactttacctttgatacatctggggagaacacagccgtg
gtcgccatggagcctggccttcggaatcagcctcccgtggaagatggggccacgggcacc
tcacagggtcttctggacagaaaggaagtgctgggaggggtcattgctggcggcctcgtg
gggctcatctttgccatatgcctggtgggcttcatgctgtaccggatgaagaagaaggac
gagggcagttactccttggaggagcccaagcaagccaatggcggcgcctaccagaaacct
accaagcaggaggaattctatgcctga

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