Dipodomys spectabilis (banner-tailed kangaroo rat): 122108826
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Entry
122108826 CDS
T07891
Symbol
Sdc1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04512
ECM-receptor interaction
dsp04514
Cell adhesion molecules
dsp04820
Cytoskeleton in muscle cells
dsp05144
Malaria
dsp05205
Proteoglycans in cancer
dsp05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122108826 (Sdc1)
04514 Cell adhesion molecules
122108826 (Sdc1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122108826 (Sdc1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122108826 (Sdc1)
09174 Infectious disease: parasitic
05144 Malaria
122108826 (Sdc1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
122108826 (Sdc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122108826 (Sdc1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dsp04090
]
122108826 (Sdc1)
00535 Proteoglycans [BR:
dsp00535
]
122108826 (Sdc1)
Membrane trafficking [BR:
dsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122108826 (Sdc1)
CD molecules [BR:
dsp04090
]
Proteins
122108826 (Sdc1)
Proteoglycans [BR:
dsp00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122108826 (Sdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
122108826
NCBI-ProteinID:
XP_042536771
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MRRAALWLWLCALALRLQPAWPLTVATNVPPEDQDSSGDDSDNFSGSGAGALQDLTLSRP
SSSTWKDVWLLTVTPTSPEPISRGATAPSTSMVPAIERPEEGEAVVLSKVDSDFTVGEKV
VTTEPRETTQLLTTHRASTAKATTAQASATSPPHRDVQPDHHGTSAPVAPEEVDLPKVEE
GGPSATEKVVEDGATNQLPAGEGSGEQDFTFDTSGENTAVVAMEPGLRNQPPVEDGATGT
SQGLLDRKEVLGGVIAGGLVGLIFAICLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKP
TKQEEFYA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctgtggctgtggctgtgcgcgctggcgctgcgcctgcagccggcc
tggccgctgactgtggccactaatgtgcctcctgaagatcaggacagctctggagatgac
tctgacaacttctccggctcgggcgcaggtgccttgcaagatctcaccttgtcccgccca
tcttcctctacctggaaggatgtgtggcttctcacagtcacacccacgtctccagagccc
ataagcaggggtgccacagctccctcaacctccatggtgccggccatcgagaggcctgag
gagggagaggcagtggtacttagcaaagtggactctgactttactgtcggggagaaggtg
gtcaccactgagcccagggagaccacacagctcctgaccacccatcgagcctcaacagcc
aaagccaccacagcccaggcctccgccacctcccctccccacagagacgtgcagcctgac
caccatgggacctcagcacctgtagcacctgaggaagttgaccttcccaaagtggaggag
ggaggtccttctgctactgagaaggtggttgaggatggagccaccaatcagctcccagcg
ggagagggctctggggagcaggactttacctttgatacatctggggagaacacagccgtg
gtcgccatggagcctggccttcggaatcagcctcccgtggaagatggggccacgggcacc
tcacagggtcttctggacagaaaggaagtgctgggaggggtcattgctggcggcctcgtg
gggctcatctttgccatatgcctggtgggcttcatgctgtaccggatgaagaagaaggac
gagggcagttactccttggaggagcccaagcaagccaatggcggcgcctaccagaaacct
accaagcaggaggaattctatgcctga
DBGET
integrated database retrieval system