Dipodomys spectabilis (banner-tailed kangaroo rat): 122108842
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Entry
122108842 CDS
T07891
Symbol
Sox11
Name
(RefSeq) transcription factor SOX-11 isoform X1
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122108842 (Sox11)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122108842 (Sox11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122108842
NCBI-ProteinID:
XP_042536791
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSAGQSPEKSAAGGGGGGAGAGGAKTSKSSSKKCGKLKAPAAAGARAGA
GKAAAQPGDFGAAAAAGDEGALGGLRAGGGGGASGKTTVKCVFLDEDDDEDEEDDELQLR
IKQEADDEDEEPPHAQLLQPAAGQAAPPLLRRYNVAKVPASPTLSSSAESPEGASLYEEV
RAGAPSGSGAGSRLYYSFKNITKQHPPALAQPSLSPASSRSVSTSSGAGGGGGEDADDLM
FDLSLNFSQSAHGASEQPLGAGAAAAAAAAGNLSLSLVDKDLDSFSEGSLGSHFEFPDYC
TPELSEMIAGDWLEANFSDLVFTY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggcggagagcttggaagcggagagcaacctgccccgggaggcgctggac
acggaagagggcgaattcatggcgtgcagcccggtggccctggacgagagcgacccggac
tggtgcaagacagcgtccggccacatcaagcggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgccggaagatcatggagcagtccccggacatgcacaacgccgagatctcc
aagaggctgggcaagcggtggaaaatgctcaaggacagcgagaagatcccgttcatccgg
gaggcggagcggctgcggctcaagcacatggccgactaccccgactacaagtaccggccc
cggaaaaagcccaagatggacccctcggccaagcccagcgccggccagagcccggagaag
agcgcggctggcggcggtggcggcggcgcgggcgcgggcggcgccaagacctccaagagc
tccagcaagaagtgcgggaagctcaaggcgcccgcggccgccggcgccagggccggggcg
ggcaaggcggcggcgcagcccggggacttcggggcggcggcggcggcgggcgacgagggc
gcgctgggcggcctgcgcgcgggcggcggcggcggcgcgagcggcaagacgacggtcaag
tgcgtgttcctggacgaggacgacgatgaggacgaggaggacgacgagctgcagctaagg
atcaagcaggaggcggacgacgaggacgaggagccgccgcacgcgcagctcctgcagccc
gccgcgggccaggcggccccgccgctgctcagacgctacaacgtggccaaggtgccggcc
agccccacgctgagcagctcggccgagtctcccgagggcgccagcctctacgaggaggtg
cgggcgggcgcgccctcgggctccggggccggcagccgcctctactacagcttcaagaac
atcaccaagcagcacccgccggcgctggcgcagccctctctgtcgcccgcgtcctcgcgc
tccgtctccacctcctcgggcgcgggcggcggcggcggcgaggacgccgacgacctgatg
ttcgacctgagcttgaatttctcccaaagcgcgcacggcgcgagcgagcagccgttgggg
gccggcgcggcggccgcggcggcggcggccgggaacctgtccctgtcgctggtcgataaa
gatttggattcgttcagcgagggcagcctgggctcccacttcgagttccccgattactgc
acgcccgagctgagcgagatgatcgcgggggactggctggaggcgaacttctccgacctg
gtgttcacgtattga
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