Dipodomys spectabilis (banner-tailed kangaroo rat): 122108897
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Entry
122108897 CDS
T07891
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04015
Rap1 signaling pathway
dsp04510
Focal adhesion
dsp04722
Neurotrophin signaling pathway
dsp04910
Insulin signaling pathway
dsp05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
122108897 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122108897 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
122108897 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
122108897 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
122108897 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
122108897
NCBI-ProteinID:
XP_042536846
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MGNAVEKQKPLSRTHLCPWRQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPTEGSVK
IPEKPGNKEARDRFLPEGYPVPLDLEQQTVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKETVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
SPAGKPDSQPELPLTDREMEILNKATSASTSTELLPDSADEEAAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDMDCYAQRRLSGGSRSCGG
ESPRLSPCSSTGKLSRSDEQLSSLDRDSGQGSRNTSCETLDHYDPDYEFLQQDLSDADQI
PQQAACHLSPLPESLGESGSPFLGHPFQLPLGCPQPEVPLAPGQQMDTPPALPEKKRRSA
ASQGPDGSGSRTPYERHPSQYDNLSEDDLQSQPPGPPGPYPPFAAVLPFQPAGFTAPESA
GDPEKPPPLPEKKNKNMLAYMQLLEDYSEPQPSVFYQTPQSEHIYQQKNKMLMEVYGFSD
SFGAGDAAQELAPPPALPPKQRQLETPAGKDGHPRDPSTASTPGKDSRDGGERAPKSPDA
LESQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYC
EAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTE
EILKLLMELVFRLVSSGELSLARVLRKNILDKVDQKKLLRCAHSDQPLAARGVAARPGTL
HDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSI
IMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQRQTSEGLAE
YCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDFIDGKVNFSKRWQQF
NILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEK
T
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgccgttgaaaagcagaaacccctgagccgaacccatctgtgcccctggaga
caagactcgcagcgttcacacctctcctccttcaccatgaagctgatggacaaattccac
tctcccaaaatcaagagaacgccgtccaagaagggaaagcccactgaggggtcggtgaag
attccagagaaacctgggaacaaagaggcaagagacagatttctaccagagggctaccct
gtccccttggatctggagcagcagacagtagaatttatgtccaccagtgctgtggcttcc
aggtctcagaggcagaagaacctgagctggctggaagagaaagagaaggaagttgtcagt
gccttgcgctactttaagacaattgtggacaaaatggctattgataagaaggtactggag
atgcttccagggtccgccagcaaggtgctggaggccatcttacccttggtgcagaccgac
ccccggatccagcacagctcagccctctcctcctgctatagccgggtgtaccaaagtctt
gccaacctcatccgttggtctgaccaggtgatgcttgaaggggtgaactcagaggataag
gagacagtgacaacggtgaagggcgtcatcaaggccgtgctggacggagtgaaggagctg
gtcaggctgaccatcgagaagcagggacggccgtctccaaccagccctgtgaagcccagc
tccccagccggcaagcctgacagtcagcccgaactccccctgacagaccgagaaatggag
attctaaacaaggcaacaagtgcatcgacctccacagagttactcccagattcagccgac
gaagaggccgcgccccctaagccccccttgcctggcatccgggtggttgataatagtccc
ccagcattgccacctaagaaaagacagtcggctccatcccctacccgagtggccgtggtg
gcccccatgagccgggccaccagtggctccagtttgcccgtgggaatcaacagacaggat
ttcgacatggactgttacgcacagaggcgcctgtccggaggcagccggtcgtgtggcggc
gagtcgccccgcctgtccccctgcagcagcacgggcaagctcagccgatcggacgagcag
ctctcctccctggacagggacagcgggcagggctcccggaacacaagctgtgaaacgcta
gatcactatgatcctgactacgaattcctccagcaagacctctccgacgcggaccagata
cctcagcaagcagcctgtcaccttagcccactgccagagtccttgggggagtcgggatct
ccgtttcttggccaccctttccagctgcccctgggctgtccccagcctgaggtgcccttg
gccccagggcagcagatggacaccccacccgcccttcccgagaagaagcgccgcagcgcc
gcctcgcagggcccggacggctccggcagcaggacgccctacgagcggcacccctcgcag
tacgacaacctctccgaggacgacctgcagagccagccccccggcccgcccggcccctac
ccgcccttcgccgctgtcctccccttccagcccgcgggcttcactgctccagaatcagca
ggtgaccccgagaagccaccgcctctaccagagaagaaaaacaaaaacatgctggcctac
atgcagctgctggaggactactcagagccgcagccgtccgtgttctaccagacgccgcag
agcgagcacatctaccagcagaagaacaagatgctcatggaggtctatggcttcagcgac
tcctttggcgccggggacgctgcccaggagctggccccaccacccgccctcccccctaag
cagcggcagctggagacccctgctgggaaagatggacatcccagagatccctcgacggcc
agcacgcctgggaaggacagcagagatggcggggagagggccccaaagtccccggatgct
ctggagtctcagtcagaagaggaagtggacgagctatcgctcattgaccacaatgagatt
atggccaggctgacactcaagcaagagggtgacgacgggcccgatgtgcgcggggggtcg
ggggacatcttgctggtccacgccaccgagacagacagaaaagatctggtgctgtactgc
gaagccttcctgaccacctaccgcaccttcatcagccccgaggagctcatcaagaagctg
caatatcgctacgagaagttctcccctttcgcggacacgttcaagaagcgcgtcagcaag
aacacgttcttcgtgctggtgcgggtggtggatgagctctgcctggtggagctgacggag
gagatcctgaagctgctcatggagttggtcttccgcctggtgagcagtggggagctcagc
ctggcccgagtgctgcgcaagaacattctggacaaggtggaccagaagaagctgctcagg
tgcgcccactccgaccagcccctggcagccaggggcgtggcagccaggccagggaccttg
catgacttccacagccatgaaatcgccgagcagttgacactactggacgccgagctcttc
tataagatcgagattccagaggttttactttgggccaaagaacagaatgaggagaagagc
cccaacctgacccagttcacagagcacttcaacaatatgtcctactgggtccgctccatt
atcatgctgcaggagaaggcccaggaccgggagcgactgctcctgaagttcatcaagatc
atgaagcacctgcggaagctgaacaacttcaactcctacctagccatcctctccgcgctg
gactcggcgcccatccgcagactggagtggcagaggcagacctcagagggcctggctgag
tactgcaccctgatcgacagctcgtcctccttccgggcctaccgggccgcactctcggag
gtggagcccccatgcatcccttacctgggtctgatcctccaggacctgacctttgttcac
ctggggaaccctgacttcatcgatgggaaggtcaacttctccaagcggtggcagcagttc
aacatcctggacagcatgcggtgcttccagcaggcgcattacgacattcgcagaaacgat
gacatcatcaacttcttcaatgacttcagcgatcacctggccgaggaggccctgtgggaa
ctctcactgaagattaagcccaggaacatcacgaggaggaaaacggaccgagaggagaag
acctag
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