Dipodomys spectabilis (banner-tailed kangaroo rat): 122108957
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Entry
122108957 CDS
T07891
Symbol
Exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122108957 (Exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122108957 (Exosc2)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122108957 (Exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122108957 (Exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
122108957
NCBI-ProteinID:
XP_042536992
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MALEMRLPVVRRPLSESLGRDSKKHLVVPGDTITTDTGFMRGHGTYMGEEKLLASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKDEDAGGFIANLEPVSLADREVISRLRNC
IVLLVTQKMLLYDTSILYCYEASLPHQIKDILKPDVMEEIVLETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagatgaggcttccagtggttcgcaggcctctcagcgagagcctgggccgc
gactctaagaaacacctggtggtgccgggggacacgatcactacggacacgggcttcatg
cgaggtcatggaacgtatatgggggaagagaagctccttgcatctgtggctggctctgtg
gagagagtgaacaagctgatctgcgtgaaagctctgaaaaccagatacaacggtgaagta
ggagacattgtagtgggcagaatcacagaggttcagcagaagaggtggaaggtggagact
aactctcggctggactcagtcttgctgctttcatccatgaacctgcctggaggagagctg
aggaggagatcagcagaagatgagcttgccatgagaggtttcttgcaggaaggggacctc
atcagtgctgaggtccaggcggtgttctcagatggcgctgtctctttgcacacgaggagt
ctgaaatatggaaagctaggtcagggcgttttggtgcaagtgtcgccctctctggtgaag
cggcagaagactcacttccatgacttgccctgcggagcctcggtgattctgggtaacaat
ggcttcatctggatctatccgacccccgagcacaaagacgaggatgctgggggcttcatt
gccaacctggagcctgtctctcttgctgatcgagaggtgatctcccggctccggaactgc
attgtcctgctggtgacccagaagatgctgctctatgacaccagtatcctgtactgctac
gaggcctccctcccccatcagatcaaagacatcttgaagccagatgtaatggaggagatt
gtactggagacacgccagcggcttttagaacaggagggctga
DBGET
integrated database retrieval system
