Dipodomys spectabilis (banner-tailed kangaroo rat): 122109042
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Entry
122109042 CDS
T07891
Symbol
Gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122109042 (Gle1)
03015 mRNA surveillance pathway
122109042 (Gle1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122109042 (Gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122109042 (Gle1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122109042 (Gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
122109042
NCBI-ProteinID:
XP_042537139
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MPSEGRCWETLQALRSSHKGRLCYNRDWLLRGEDVLEECMSLPKLSSYSGWIVDHVLPHK
QAEENSSSSENSPSSDSTSALDQALLVPTSPIRSYASSPASPTSPNGAKDKHEPQHPEPM
ALQSSRGVRVEGCIRMYEFLHRMKGTEGLRQWQEEQERKVRSFSEMASEQLKRFDERKEL
KQHKEFQDLREVMEKSTREALGHQEKLKAEHRHRAKILNLKLREAEQQRIKQAELERLQK
EEGQVRLRSLYTLQEEVLQLSQQLEASDQHGDLQGVSLAAFRTRGNQLCSLISAIIRAAS
ESGYPTAENQAEAERAVQEMRELVTNLGQEITRACEDKKRQDEEEAQAKLQESQMQQGSG
TPTPTPAPSQDPGGTQNEDLQVKVQDSTMQWYQQLQEASAQCVLSFEGLTSSKDSQMKKI
KMDLQKAATIPVSQISTIAGSKLKEVFDKINGLLSGKLVQSGGHSVSITLNPQGLDFVQY
KLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGNLILAHLHKKCPYSVPFYPAF
KEGMALEDYQRMLGYQVKDSKMEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQATHPHGL
NHGWRWLAQILNMEPLADVTATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEA
ITSSGQMGSFIRLKQFLEKCLQRKEIPVPKGFLTSSFWRS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgagggtcgctgctgggagaccctgcaggcgctccgcagttcccataaaggc
cgcctgtgctacaaccgcgactggctgctgcggggcgaggatgttttagaagagtgtatg
tctcttcccaagctatcttcttattctggatggatagtagatcacgtcttacctcataag
caagctgaagaaaactcctcttcctctgagaattcaccatcttctgactctacttcagcc
ctagaccaggctttgcttgttcccacatctcccatcagaagctatgccagctcaccagca
tctcctacatcaccaaatggagctaaggacaaacatgagccgcagcacccagaacccatg
gccctgcagtcctcccgaggggtcagagtggaaggctgcatccgaatgtatgaatttttg
catagaatgaaaggaacggagggcttgaggcagtggcaggaggaacaagagaggaaggta
cgctccttctcagagatggcatctgaacagctgaagcggtttgatgaacgcaaagaactg
aagcaacataaagaattccaggacttgcgggaagtgatggagaagagcactagagaagct
ctgggccaccaggagaagctgaaagctgagcatcgccacagagccaagattctcaacctg
aagcttcgggaggcagagcaacagcgcattaaacaggcagagctggagcggctacagaag
gaggaaggccaggtccgacttcggagcctttacaccctgcaggaggaggtgctgcagctc
agccagcaactggaggcctctgaccagcatggggacctgcaaggggttagcctggctgcc
ttccgcaccaggggcaaccagctatgcagcctaatctctgcgatcattcgtgctgcatca
gagagtggctatcccacggcagaaaaccaggctgaggctgaacgagccgtgcaggaaatg
cgggagcttgtcacaaacttgggccaggaaatcaccagagcctgtgaagacaagaaacgg
caggatgaagaggaagctcaagccaagctgcaagaatcccagatgcaacaggggtctggg
acccccacgccaaccccagcccctagccaggacccaggagggacacaaaatgaagacctc
caggtgaaagtacaagacagtaccatgcagtggtaccagcagctgcaggaggcttctgct
cagtgtgtattgtcctttgagggcctgaccagcagcaaggacagtcagatgaaaaaaata
aagatggacttgcagaaggctgccactatcccagtaagccaaatctccaccattgcaggc
tcaaaactaaaggaggtctttgacaagatcaatggcctgctctccggaaagctggttcag
tccggtgggcactctgtgtccatcacacttaacccacaagggctggacttcgttcagtac
aaactggcagagaaatttgtgaaacaaggcgaggaggaagtggcctcccaccatgaagca
gcattccccattgcagtggtggcgtctgggatctgggagctccaccctagagtggggaac
ctcatccttgctcatctccacaagaagtgtccttactctgttccgttctaccccgctttc
aaggagggaatggctttagaggactatcagcggatgcttggctatcaagtgaaagactcc
aagatggaacagcaagacaactttctaaagcgcatgtctgggatgatccgtctctatgct
gccatcatccagctccggtggccatatggaaaccaacaagcaactcaccctcacggcttg
aatcatggctggcgctggctggcgcagatcttaaacatggagcccctggcagatgtgaca
gccacccttctttttgacttcctggaggtgtgtgggaatgccctcatgaagcaataccag
gtccagttctggaagatgatacttctcattaaggaggactacttccccagaattgaagcc
atcacaagttcaggacagatgggttcttttatacgtctgaagcagttcttggagaaatgt
ttgcagcgcaaggagattcctgtccccaagggctttctgacttcctccttctggcgctcc
tga
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