Dipodomys spectabilis (banner-tailed kangaroo rat): 122109072
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Entry
122109072 CDS
T07891
Symbol
Snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122109072 (Snapc4)
03021 Transcription machinery [BR:
dsp03021
]
122109072 (Snapc4)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122109072 (Snapc4)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
122109072 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
122109072
NCBI-ProteinID:
XP_042537201
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MDIDAEREKITKEIKELERILDPSSSSMHLEVSESSLDSSGSEADSLPNEDSDTTGAPVL
EGERWGEASNDEEDHKDKTLPEDPETCLQLNMVYQEVIREKLAEVSQLLAQNREQQEEIL
WDLAGSKGLKMKEGRSLPPNMYIGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEAL
LVTKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLRQKQSRVSSEPERQALEKQVREAE
KEIQDINQLPEEALLGNRLDSHDWEKISNVNFEGGRSAEEIQKFWQSSEHPSINKQDWST
EEAERLRAIAAKHGHLEWQLVAEELGTGRSAFQCLQKFQQHNTALKRKEWTEEEDHMLTQ
LVQEMRVGDHIPYRRIVYYMEGRDSMQLIYRWTKSLDPSLKKGFWTPEEDAKLLQAVAKY
GEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNAKEEEQLIELIEKYGVGHWAKI
ASELPHRSGSQCLSKWKIMVGRNQSLPRRRRRRRPRRRVRWSSSSSSDGGSEDSADASSS
SSSSSSSSSSSSESSEAELEEPQGQARVLLPPQYTVPDLDLWVPARQSGSQPQKGGASSS
LPKGFDTAPSRPKEVTTSAPGGEPPSRIQGTIPRGVQYPHPPDTHPVNVEEPACEKERQR
QPALPDSPPGPGPGDGMTGPHLKRLWRQRQRHTLRQRLLDRKLLLAVTPWVGDVTLPCTQ
ASRRPGAVQTHADSVRMKLEHAHLASTPVFTLFIQLLQIDTAGCMEVVRERKARPLTALQ
PGAQAPLSRLLQESASARSTPGRPFPNAPPQGTAQNTSHVGCRGLGSCHTESASSQVPAP
APCGPRPKPKTVSELLREKRLRESRAKKATQAPVALQPQLLVSSPVVLQPSLPPASQGLP
APCLTITNPTLSGPGSPVLANASPWGSWQEAGASAKDERPAGLQAVTLTPVLPGAHGTAS
SACSLPALGLSQGPVSCPPSSLGQPQAPATSQEQSLPRVLPLFPTTPCPVELPVQPLSLP
PQGGSPLASLPLPVTWVLTAQGLLPVPVQAMVGVSGQVATPDPAGLPATLPPPPAETPCL
SPASADPEPIPSSTTLPPPGLLSRSSAEDGEPQCAPAEAQASHTEAEPPRLNQLPTHSAP
GCRGDAVGIPGNSSGSLSLERPEKGAWDLGLLSQENEAALRKWLRGQQGAHVPQLESRLP
YQPPALCNLRVLSSLLLHKKALEQKAASLLAGAEPEAGATQSSLGLVRRRLRDNPAYLLL
KTRFLATFALPAFLATLPPCGVPTTLSLAPRVDTESEDDLGELDCKDMSSVVQVGPVAVS
PTQRSPHPGKASAPSQLDTSDDLHVLRTRHAQHARKRRRLP
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggacatagatgcagaaagagagaaaataacaaaggagatcaaggagctggaaaggatt
ttggatcccagttcttccagcatgcacttggaagtctctgaatcaagtctcgattcctca
ggctctgaagcagattcgctgcccaatgaagactcagacaccactggtgctccagtcttg
gaaggggaaaggtggggtgaggccagcaatgatgaagaggaccacaaggataaaacactc
cctgaagaccctgagacttgtctgcagctcaatatggtctaccaagaggtcatccgagag
aagctggcagaggtcagccagttgctggcccagaaccgggagcagcaggaggaaattcta
tgggatttggctggctccaaaggcctcaagatgaaggaaggcagaagcctgcctcccaac
atgtacataggccacttcatgaagccgtacttcaaggacaaggtcactggagtgggtccc
cctgccaatgaagacactcgagagaaggccgcccaaggaatcaaggccttcgaggcgctc
ctggtgaccaagtggaagcactgggagaaagccctgctccggaagtctgtggtgagcgac
cgcctgcagcgtctgctccagcccaagttgctaaagcttgagtatttacgccagaagcag
agccgtgtgtccagtgagccagagaggcaggccctggagaagcaagtcagggaagcggag
aaggagatccaggatatcaaccagcttccagaagaagccttgctggggaacaggctggac
agccatgactgggagaagatttccaatgtcaattttgaaggaggccgcagtgcagaggag
attcagaagttctggcagagctctgagcacccaagcatcaacaagcaggattggagcaca
gaggaggcagagcggctgagggccatcgcagccaagcatggccacctggaatggcagcta
gttgcagaggagctagggaccggccgcagtgccttccagtgcctgcagaaattccagcag
cacaacacagcactgaagcgcaaggagtggacagaggaggaggaccacatgctcacccag
ctggtccaggagatgcgtgtcggggaccacatcccataccgcagaattgtctactacatg
gaagggagagactcgatgcagctgatctaccgatggaccaagagcttggatcctagcctg
aaaaaggggttctggacccctgaggaagacgctaagctgcttcaggctgttgccaagtac
ggggagcaggactggtttaaaatcagagaagaggtgccaggcaggagtgatgcccagtgc
cgggaccgctatctcagaagattacatttcagcttgaagaagggacgatggaatgcaaaa
gaagaggagcagttaattgaattaatagaaaaatatggtgttggtcactgggcaaaaatt
gcttctgaactacctcatcggtcaggttcccagtgtctgagcaagtggaaaatcatggtt
gggaggaatcagagtctccctagacggcggcggcggcggaggcctcgccgcagggtccgc
tggagctccagtagcagcagtgacggcggcagtgaggacagtgctgatgccagcagtagc
agcagcagcagcagcagcagcagcagcagcagcagtgagagctcagaggcggaactggaa
gagcctcaggggcaagcaagagtgctgctgcccccacagtacacagtaccagacctggac
ctgtgggttcctgccaggcaaagtggtagccagccacagaaaggaggtgcctcctcttcc
ctccccaagggctttgatactgccccaagtcgccccaaggaagttaccacctctgctcct
ggaggggagccgccttccaggatacaaggcaccatcccaagaggggtccagtacccacac
ccaccagacactcacccagtgaacgtggaggagccagcctgcgagaaggaaagacagagg
cagccagccctgcctgactcacccccaggacctggccctggagacggcatgactgggccc
cacctgaagaggctgtggcggcagcgccagagacatactttacgccagagactcctggat
cgcaagcttctgctggccgtgacgccctgggtgggtgacgtcaccctgccctgcacacag
gcttcccggaggccgggggcagtgcagactcacgctgacagcgtcaggatgaagctggag
catgcacacctagccagcactccagtgttcacgctgtttatccagctgctccagatagac
actgcaggctgtatggaggttgttcgagagaggaaggcccggccgctcacagcactccag
cctggtgctcaagcaccactgtcacgtcttctgcaggagtccgccagtgcccggagcacc
ccaggccgccccttcccgaatgcgccaccccagggcactgctcagaacaccagccatgta
gggtgcagagggctggggtcctgccacactgagtctgcctcatcccaggtgcctgcgcct
gccccatgtggcccccggcccaagcccaagacagtgtctgagctgctgcgagagaagcgg
ctccgggagtcgcgtgccaagaaggccacccaggcccccgtggctctccagccccagctg
ttggtctcctcacctgtggtcctgcagccctctctgcccccagcctcccagggcctccca
gccccatgccttaccattaccaaccccacgctgtcagggcccgggagccctgtgctggcc
aatgcaagcccttggggctcctggcaggaggctggggcttcagccaaggatgagaggcct
gctggcctacaagctgtgaccctcacccctgtcctcccaggagcccacggtacagcctct
tctgcctgcagcctccctgctctgggcctcagtcagggccctgtgagctgtcccccaagc
agtctagggcagcctcaggcccctgccacgtcccaggaacagagcctgcccagagtcctg
ccccttttccccaccaccccttgccctgttgagctgcctgttcagcccctcagcctgcca
ccccagggggggtctcccttagccagcctgcccctgccagtcacctgggtgctcacagca
caggggctgctccctgtgcccgtgcaagctatggtgggcgtgtctgggcaggtggccact
cccgaccctgcagggctgccagcaacactgccacctccccctgctgagaccccttgcctg
tccccagccagtgcagacccagagcctatcccttcctccacgacactgccccccccaggc
ctcttgtcgcgaagctcagctgaagacggtgagccccagtgtgccccagcagaggcccag
gccagccacacagaagcagaaccccccagactgaaccagctgcctacccacagtgcccct
ggctgcaggggtgatgcagtggggataccagggaactcctcggggtcactgagcctggag
aggcctgagaagggcgcgtgggacctgggcctgctctcccaagagaatgaggctgccctg
aggaagtggctgagggggcagcaaggtgcccatgtgccccagctagagagcaggctgccc
taccagccccctgccctgtgcaacttgcgggtgctgtccagcctcctactccataagaag
gccttggagcagaaggccgcctctctgctggcgggagccgagccggaggccggggccacc
cagtcctcgctgggcctggtgcggaggcggctccgggacaacccggcctacctcctgttg
aagacacggttcctggcaaccttcgcgctccctgcattcctggccactctgcctccctgt
ggtgtccccaccaccctgtcactggccccaagggtggacacggagagtgaagacgacctg
ggggagctggattgcaaggacatgtccagtgtagtgcaagtgggcccggtggccgtgagc
cccacccagaggtccccacaccccggcaaggcctcagccccttcccagctggacacttct
gatgaccttcatgtgctcaggacccgtcatgcccagcacgcccggaagcggaggcggctg
ccatga
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