Dipodomys spectabilis (banner-tailed kangaroo rat): 122109324
Help
Entry
122109324 CDS
T07891
Symbol
Atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136
Autophagy - other
dsp04140
Autophagy - animal
dsp04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122109324 (Atg4c)
04140 Autophagy - animal
122109324 (Atg4c)
04136 Autophagy - other
122109324 (Atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsp01002
]
122109324 (Atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122109324 (Atg4c)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122109324 (Atg4c)
Peptidases and inhibitors [BR:
dsp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122109324 (Atg4c)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122109324 (Atg4c)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122109324 (Atg4c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
122109324
NCBI-ProteinID:
XP_042537538
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFVSAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKTLL
ARSGCAIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSDSESWTSHTVKKFTTSFEASLSGERELKTPTISLKE
KVKKYSDDHEIRNEIYHRKIISWFGDSPLALFGLHQLVEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEAKHPDLQGITIYVAQDCTVYSCDVIDKQSASMTSGNADDKAVIILVPVRLGGE
RTNTDYLEFMKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFVN
GHSRDYDFTSSTTNEEDLFSEDEKRRLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgaagttgacaagttaaaaaccaaatttgtatctgcttgg
aacaacatgaaatacagttgggtgttaaaaacaaagacgtattttagtagaaattcccct
gtattattacttggtaaatgttatcattttaaatatgaggatgaaaataaaacattactt
gcaagatcaggatgtgcaatagaagatcatgtaattgcgggaaatgtagaagaatttcgt
aaagatttcatttctagaatatggctgacctacagggaagaatttcctcaaatagagggc
tcagccttgacaacagattgtggttggggctgtacactaagaactggccaaatgctctta
gctcaaggactcatactacactttcttgggagagcttggacttggcctgatgccctgaat
attgaaaattcagactctgaatcatggacttcccacactgtgaaaaaatttactacatct
tttgaagcatcgctttcaggagaaagagaactcaaaactccaacgatttctctgaaggaa
aaagttaagaaatattctgatgatcatgaaattcgaaatgaaatttaccataggaaaatc
atttcctggtttggtgattccccgttggctctttttggcttacatcaactagtggaatat
ggaaagaaatcggggaaaaaagctggagattggtatggaccagctgttgttgctcacatt
ttaagaaaagcagttgaagaagcaaaacaccctgatttacaaggaataactatttatgtt
gcacaagactgtacagtttacagttgtgatgtaattgataaacaaagtgcttcaatgact
tctggtaatgctgatgacaaagctgttattattttagttcctgtaagacttggtggagaa
agaaccaacacagactacctggagttcatgaagggtgttctaagccttgaatactgtgtg
ggtattattggtggtaaaccaaaacagtcatactactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaattttcttctaaggaaaaatatcctttatttacttttgtaaat
ggccattccagagactatgattttacatcttctactaccaatgaagaagacctgttttca
gaggatgagaagagacgattaaaaagatttagcacagaagaatttgtcttactttaa
DBGET
integrated database retrieval system
