Dipodomys spectabilis (banner-tailed kangaroo rat): 122109363
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Entry
122109363 CDS
T07891
Symbol
Dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122109363 (Dennd4b)
Membrane trafficking [BR:
dsp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122109363 (Dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DDHD
SPA
TFIIA
Motif
Other DBs
NCBI-GeneID:
122109363
NCBI-ProteinID:
XP_042537616
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MLPPPPSPHTHTHRLTSAELQLPLHCFRKYNLPFPLRHPPAYRPLPPGTHQAPSQLLHPG
VPQDCCRSAPSPWGQAMEADAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPIPEETWVPE
PSGPLRSPRPAEPITDVAVIARALGEEVPQGYTCIQTSAGGHPLELSAGLLGGTQPVICY
RRGRDKPPLVELGVLYEGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEG
AGLHALGITDLCLVLPSKGEGTPHTYCRLPRNLNPGMWGPAVYLCFKVGLAKANTLAYEA
ELLGRYPEEDNEAFPLPESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYG
AALQFYEAFPRARLSERQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAF
LTFLYRYSVSGPHRLPLEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPL
SGASFLQLLQSLGPELAVTLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPY
IPLCPLVLADVLSAPVPFIVGIHSSYFDLHDPPADVICVDLDTNTLFQTEEKKPLSPRTL
PRRPYKVLLATLTNLYQQLDQTYTGPEEETSLEFLLTDYEAVCGRRARLEREVQGAFLRF
MACLLKGYRDFLRPLTQAPSEGARDVDNLFYLQGFLKSRERSSHKLYSQLLHTQMFSQFI
EECSFGSARHAALEFFDSCVDKVHPEQEKPEPTALVELEELSGSELTVFITPPEEPPVPE
GGESTPQYCYDGFPELRAELFESPQEQTGALPVPGPSRSTPSSPAPRRTKQEMKVAQRMA
QKSATVPELWARCLLGHCYGLWFLCLPAYVRSAPSRVRALHTAYHVLREMESRKVVLPDE
VCYRVLMQLCSHYGQPVLSVRVMLEMRRAGIVPNTITYGYYNKAVLESKWPSGTPGGRLR
WAKLRNVVLGAAQFRQPLRERQQQQQQQQQQQKQQQQQQQQQQQQQQQQQKVTAHQEAGS
SQTESYLERLSPNRPLQRQTTWAGRSIRDPASPTGRLVKSGSLGSARGAQPTVEAGVAHM
IEALGVLEPRGSPVPWHDGSLSDLSLTGEDPATGGSPGGSGSVLSAQSTEALEGLSGRGS
KASGHQDEAGTPRRGLGARLQQLLTPSRRSPASRIPPVELPPDLPPPARRSPMDSLLRPR
ERPGSTASESSASLGSEWDLSESSLSSLSLRRSSERLSDTPGPFQPPSLEILLSSCSLCR
ACDSLVYDEEIMAGWAPDDSNLNTTCPFCACPFVPLLSVQTLDSRPSASSPKPTPAGASD
SKDAPVPGGPGPVLSDRRLCLALDEPQLCNGHMGGASRRVESGAWAYLSPLVLRKELESL
VENEGSEVLALPELPAAHPIIFWNLLWYFQRLRLPSILPGLVLASCDGPPPTQLPQAPPP
WLTPDPASVQVRLLWDILTPDPNSCPPLYVLWRVHSQIPQRVVWPGPVPACLSFALLELV
LRHVGLNEVHKAVGLLLETLGPPPTGLHLQRGIYREILFLTMAALGKDHVDIVAFDKKYK
SAFNKLANSMGKEELRQRRAQMPTPKAIDCRKCFGAPLEC
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgctccccccaccaccgtcaccacacacacacacccataggctgacttctgctgagctg
cagcttcccctccactgtttcaggaagtataacctccctttccctctgaggcacccccca
gcctatcggcccctgccaccaggcacccaccaagctccatcccagcttctgcaccctggg
gtgccccaggactgttgccgctccgctccttctccctggggtcaggccatggaggcagat
gcagtgagtgaggggggggccatggcggaggagcggcccccccggctggtggattatttc
gtggtagctgggcttgcagggaacggagcacccatccctgaggaaacgtgggttccagaa
cccagtgggcccttgcgctctccccggccagctgagcccatcacagatgttgcagtcatc
gctagggcactgggcgaggaggtgcctcagggctacacatgcatccagacttctgctggg
ggccaccccttggaactcagtgccggactcctggggggaactcaacctgtcatctgctac
cgcaggggccgtgacaagccccccctcgttgaactgggggtgttatatgaggggaaggaa
cgtcccaagcctggcttccaagtccttgacacgacaccctacagccactcagccaacttg
gcccctccaggccctgggcatccccgcacctacctcacttaccggcgggcagcagagggg
gcagggctgcatgccttgggcatcactgacctctgcctggtgctgcccagtaaaggcgag
ggcacgcctcatacttactgccggttaccccgcaacctcaatcctggcatgtggggccca
gcagtgtacctgtgcttcaaggtgggcctggccaaggccaacacgctggcatatgaggca
gagctgctgggccgctacccggaggaagacaatgaggcgttcccgctgcccgagtcagtg
cccgtcttctgcctgcctatgggggccactatcgagtgctggcctgcccagaccaagtac
ccggtgcccgtcttctccacctttgtgctcacgggtgctgctggtgataaggtgtacggt
gcagccctgcagttctacgaggcgttccccagggccagactgtcagagcgacaggcacgg
gcactcggcctgctgagtgccgtggagcggggccgggcactggggggccgagctgtgcgt
agtcggcgtgccattgctgtgttgtcccggtggcctgccttcccagccttccgagccttc
ctcaccttcctttatcgctactccgtctcaggcccccaccgcctgcccttggaagcgcac
atctcccacttcattcacaacgtcccattcccttccccacagagaccccgcatcctagtg
cagatgtctccctatgacaacctgctcctgtgtcagcctgtgtcctcacccctacccctc
agtggtgccagtttcttgcagctgctgcagagcctgggccctgagctggctgtcacactg
ctgctggctgtgctcacagagcacaaactgctggtccactcactgcggccggacctgctc
accagtgtctgtgaggcccttgtctcgatgatcttcccgctgcactggcagtgtccctac
attccactttgcccgctggtgctggcagatgtgctgagcgcccccgtgcccttcattgtg
ggtatccactccagttactttgatctgcatgacccacctgcggatgtcatctgtgtcgac
cttgacaccaacacgctcttccagacagaggaaaaaaagcccctctcccctcggaccctg
ccccgcagaccctataaagttctgctggccacactgacaaatctctatcagcagctggac
cagacttatactggaccggaggaggagacatctctggaattcctgctgacagactacgag
gcagtgtgtggtcgccgggcccgcctggagcgggaagtccagggagccttcctgcgcttc
atggcctgtctgctcaagggctacagagacttcctgcgtcccctcacccaggccccctct
gagggggctcgtgatgttgacaacctcttctaccttcagggtttcctcaagtctcgtgaa
cgctccagccataagctgtactctcagctgctgcacacacagatgttctcacagttcatt
gaggaatgttcttttggctctgctcgacatgctgcccttgaattctttgactcttgtgtt
gataaggtccacccagagcaggagaagcctgagccgacagccttagtggagctggaagag
ctatctggaagtgagctcactgtctttatcacaccccctgaggagcccccagtaccagag
ggtggggaatctactccccagtactgttacgatgggttcccagagctgcgtgctgagctg
tttgagtctcctcaagagcagacaggggccctgcctgtgccaggcccatcccgtagcact
cccagcagtcctgcccctcgccgtaccaaacaggagatgaaggttgcacagcggatggca
cagaagtcagcaactgtgccggagctttgggctcggtgcctgctggggcactgctatggg
ctgtggttcctgtgtctgccagcctatgtgcggtctgcaccctcccgggtgcgggcccta
cacacagcctaccacgtactgcgtgagatggagagccgaaaggtggtgctccctgatgag
gtgtgttaccgggtgctgatgcagctctgctcacactatgggcagcctgtgttgtctgta
cgggtcatgctggagatgcggcgggcaggcattgtgcccaacactatcacctatggttac
tacaacaaggcagtactggaaagcaagtggccatctggtacaccaggtgggcgtctgcgc
tgggccaagctccgaaatgttgtcctgggggctgctcagttccgccagcccttgagagaa
cggcagcagcagcagcagcagcagcagcagcagcagaagcagcagcagcagcagcagcag
cagcagcaacagcagcagcagcagcaacagaaggtcacagcacaccaagaggcaggcagc
tcccagacagaatcttatctggagcgactttccccaaaccgcccccttcagcgccaaact
acatgggctgggcgaagtataagggacccagcctcacccactggacgcctggtgaaaagt
ggcagcctgggcagtgcccgaggggcacagcccactgtggaagctggtgtggcccatatg
atagaggccttaggggtcctggaaccccggggctcacctgtgccctggcatgatggaagt
ctttcagatctgagcctgacaggggaggatccagcaactggaggaagcccaggaggctca
ggctcagtcctgagtgctcagtccactgaagccttggaagggctaagtggacgagggtcc
aaggctagcggacatcaggatgaggctggcaccccccgacgagggctgggtgcccgcctc
caacagctgctcactccttcccgccgttctcctgcctctcgcattcccccagtggagctc
ccccctgacctgcctcccccagcccgccgcagtcccatggacagcctcctgaggccccgg
gagcgccctggatccactgcctctgagagctcagcctctctgggcagtgagtgggacctc
tcagagtcttctctcagcagcctgagcctgcgccgttcctccgagcgcctcagtgacact
cctggacccttccagccaccttccctggaaattctgctgtctagctgctccttgtgccgt
gcctgtgattcactggtgtacgatgaggaaatcatggctggctgggcacctgatgactct
aacctcaacacaacttgccccttctgcgcttgcccctttgtgcccctgctcagtgtccag
acccttgattcccgacccagtgcctccagccccaagcctacccctgctggtgccagtgac
agcaaagatgctcctgtccctgggggtcctggtcctgtgctcagtgaccgcagactctgc
cttgctttggatgaaccccagctctgcaatgggcacatggggggtgcatctcggagggtc
gagagtggagcatgggcatacctgagccccctggtgctgcgtaaggaactagagtcactg
gttgagaatgagggcagtgaggtcttggcattgcctgaactgcctgctgcccatcccatc
atcttctggaaccttctgtggtatttccaacggctgcgcctgcctagtattctaccgggc
ctggtgctggcctcctgtgatgggcccccacccactcagctccctcaggccccacctcct
tggctaactcctgatccagcctctgtgcaggtgcgcctgctgtgggatatcctgactcct
gaccccaacagctgcccacctctttacgtgctctggagggtccacagccagatcccacag
cgggttgtatggccaggcccagtacctgcatgtcttagctttgcattattggagttagtg
ctgcgccatgttggactcaatgaggtgcacaaggctgtaggactcctgctggaaactcta
gggccccctcccactggcctgcacctacagagaggcatctaccgagagatcttattcctg
acaatggctgctctggggaaggaccatgtggacatagtggccttcgacaagaagtacaag
tctgccttcaacaagctggccaatagcatgggcaaggaggagctgaggcagcggcgggca
cagatgcctactcccaaggccattgactgccgaaaatgttttggggcacctctggaatgc
taa
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