Dipodomys spectabilis (banner-tailed kangaroo rat): 122109466
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Entry
122109466 CDS
T07891
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122109466 (Sema6c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
122109466
NCBI-ProteinID:
XP_042537822
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MPRAPYLMPLLLLLLLLLLSLPHTQAAFPQDPLPLLTSDLQGTSPLTWFRGLEDDAVAAE
LGLDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDMENCAVRGKLT
DECYNYIRVLVPWDSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSNV
AIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGEHVYF
FFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFD
VLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDVERGFEGKFKEQRSLDGAWT
PVSEDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLS
NRALLTQVAVDGMAGPHSNTTVLFLGSNDGTVLKVLPPGGQSGEPEPILLEEIDAYSPSR
CSGKRAAHTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASRDPYCG
WHSSRGCVDIRGPGGADVALAGNHEPTEHGDCRDGATGSQSGPGDSAYVLLGPGPSLETP
SSPSDVHPGPLSSTLGAHTEGVRRDLLPASASRSVPIPLLLASVAAAFALGASVSGLLVS
CVCRRTHHRRNKDVESPVLPRPLSLRSLARLHGAGLEPPPPSKDADPAPAPQLYTTFLPP
PEAGPPPELACLPTPESTPELPVKHLRASGGPWEWNQNGNNAKEGPGRARGGHAAGGPAP
RVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKAAEPPAPFTCRPLPPEPAPSPPLF
ADSGALPRECAPPLRLDVPPDGQGAAPAAPTRPALSAPAPRLGVGGSRRLPFPTHRAPPA
LLTRVPSGGPSRYSGGPGRHLLYLGRAEGYRGRAPKRVDVDKSPLSPKSPLVGAAPQGSH
FNF
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgccccgagccccctacctcatgcccttgctgctactgctactgctgctgctgctgtca
cttccccacacccaggctgcctttcctcaggaccccctccctctgttgacctctgacctg
caaggtacttccccgttaacttggttccggggcctggaggatgatgctgtggctgcagaa
cttgggttggactttcagagattcctgactttgaaccggaccttgctagtggctgcccgg
gaccacgttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaac
aagtatctaacatggaggagccaagatatggagaactgtgcggtgcgggggaagctgacg
gacgagtgctacaactacattcgtgttctcgttccctgggactcccagacactcttggcc
tgtgggacaaactcgttcagccctatgtgccgcagctatgggataacttcgctgcagcag
gagggtgaggagctgagtgggcaggctcgatgcccctttgatgccacccagtccaatgtg
gccatcttcgcagagggcagtctgtactcagccaccgctgcagatttccaggccagcgat
gctgtcgtttaccgaagccttgggcctcagccccccctccgttcggccaagtacgactcc
aagtggctccgagagccacactttgtccatgccttggaacatggagagcatgtttacttc
ttcttccgagaggtctctgtggaggatgcccggctaggaagggtgcagttctcccgggtg
gcccgggtgtgtaaacgggacatgggtggctcacctcgagccttggaccgccattggaca
tccttcctaaagctgcggctcaactgctctgttcctggggactctaccttttacttcgac
gtcttgcaggcattgactgggcctgtgaacctgcacggtcgctctgcgctctttggagtc
ttcaccactcagaccaatagcattcctggctctgcagtctgcgccttctacctggatgat
gttgagcgtgggtttgagggcaagttcaaggagcagaggagtctggatggggcctggacc
cctgtgtctgaggacagggtcccttcacccaggccagggtcgtgtgcaggtgtgggaggc
gctgccttgttctcctcttctcaagacctccctgatgacgtcctgactttcatcaaggca
cacccactgctagaccccgctgtgccacctgccacccatcagcctctcctcacgctcagt
aacagggcgctattgacccaggtagctgtggacggtatggctggcccccatagtaacacc
accgtcctgttccttggctccaatgacgggacagtgctgaaggtgctgcccccagggggg
caatccggggagcctgagcccatcctattggaagagattgatgcctacagcccttcgcgg
tgcagcgggaagcgggcagcccacacagcacgacggattatagggctggagctggacact
gaaggtcacaggctttttgtggccttctctggctgtattgtctacctccctctgagccgc
tgtgccagacatggggcctgtcaaaggagttgtctggcttctcgggacccatactgtgga
tggcacagctccagaggctgtgtggatatcagaggacctggtggggctgatgtggccctc
gctgggaaccatgagcccacggagcatggtgactgtcgagatggagccaccgggagtcag
tctggccctggggactctgcttacgtgcttctgggtcctggcccttcccttgagaccccc
agttcccccagtgatgtccaccccgggcccctgtcttccactcttggagctcacactgag
ggcgtgcgccgggacctcctccccgcctcggcctcccgctccgtccccatcccgctgctc
ctggccagtgtggccgcagccttcgccttgggcgcctcggtctccggcctcctggtctcc
tgtgtgtgtcgccgcacccaccaccgtcggaacaaggacgtggagtcgccggtgctcccg
cgccctctctcgcttcgcagcctggcccggctgcacggggccggcctggagcccccgccg
ccgtccaaggacgccgacccggcgccggcgccgcagctctacaccaccttcctgcctccg
cccgaggccgggcctccgcccgagctggcctgcctgcccacgcccgagtccacgcccgag
ctgcccgtcaagcacctccgcgcctccgggggcccgtgggagtggaaccagaacgggaac
aacgccaaggagggtccggggcgcgcgcggggcggccacgcggccggcgggcccgcgccg
cgcgtgctggtgaggccgccgccgcccggctgcccggggcaggcggtggaggtgaccacg
ctggaggaactgctgcgctacctgcacggcccgcagccgccccgcaaggccgccgagccc
ccggccccgttcacctgccggccgctcccgcccgagccggcccccagcccccccctcttc
gcggactcgggggcgctcccccgagaatgcgcgccgcccctccggctggacgtgcccccc
gacggccagggcgccgcgcccgccgcccccacgcggcccgcgctctccgccccggctccc
cgcctcggcgtcggggggagccgccgcctgccgttccccacgcaccgggcgcccccggcg
ctgctcacccgagtcccctccgggggcccctccaggtactccggggggcccgggagacac
ctcctgtacctgggccgtgccgagggctaccgcggccgcgccccgaagagggtggacgtc
gacaagtccccgttgtcccccaagtctcccctcgtcggggccgcccctcagggcagccat
tttaacttttag
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