Dipodomys spectabilis (banner-tailed kangaroo rat): 122109518
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Entry
122109518 CDS
T07891
Symbol
Hcn3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122109518 (Hcn3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dsp04040
]
122109518 (Hcn3)
Ion channels [BR:
dsp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
122109518 (Hcn3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
122109518
NCBI-ProteinID:
XP_042537895
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MEAEPRSAAGASEGTTPGLEAAPPAAPAPANAASGRNPGSAPEPKRRQLGTLLQPTVNKF
SLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKE
ENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGSEILLAPRAIRTRYLRTWFLVDLISS
IPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM
TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSMNRMVNHSWGRQYSH
ALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY
QEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCR
GLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGA
QDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVA
MDRLRRIGKKNSILQRKRSEPSPSSSGGIMEQHLVQHDRDMARGVRGLAPGTGARLSGKP
VLWEPLVHAPLQAAAMTSNVAIALTHQRGSLPLSPDSPATLLARSARRSAGSPASPLVPV
RAGPLLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSA
SQPSLPQRATGDGSPGRKASGSERLPPSGLLAKPPGTAQAPRSSVPEPATPRGPQLSANM
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagccgcggtcggcggccggggccagcgaagggacgacccctgggctggaa
gcggcgcctcccgctgctccggctccagcgaacgcggcctcgggtcggaacccggggtcc
gcgccggagcctaagcgaaggcagctcgggacgctgctgcagcccacggtcaacaagttc
tccctccgggtgttcggcagccacaaggcagtggaaatcgagcaggagcgggtgaagtca
gcgggggcctggatcatccacccctacagcgacttccggttttactgggatctgatcatg
ctgctgctgatggtgggaaacctcatcgtactgccagtgggtatcacctttttcaaggag
gagaactccccaccctggattgtcttcaacgtcctctctgacactttcttcttgctggat
ctggtgctcaacttccgaacgggcattgtagtggaggagggctctgagatactgttggca
ccacgtgccatccgcactcgctatctgcgtacctggttcctggttgacctcatctcctct
atcccagtggattacattttcctagtggtggagctagagccaaggctggatgctgaggtc
tacaaaacagcgagagcattgcgcatcgttcgctttaccaagatcctcagcctgctgcga
ctgctccgcctctcccgcctcatccgctacatacaccagtgggaggagatctttcacatg
acctatgacctggccagcgctgtggttcgcatcttcaacctcattgggatgatgctgctc
ctctgtcactgggatggctgtctgcagttcctggtccccatgctgcaggactttcctccc
gactgctgggtctccatgaaccgcatggtgaaccattcgtggggccgccagtattcccac
gccctgttcaaggccatgagccacatgctgtgcattggctatgggcagcaggcacctgta
ggcatgcctgacgtctggctcaccatgctcagcatgattgtgggtgccacgtgctacgcc
atgttcatcggtcatgccactgcactcatccagtccctggactcttcccggcgtcagtac
caagagaagtacaagcaggtggagcagtacatgtccttccacaagctgccagctgacaca
cggcagcgcatccatgagtactacgagcatcgctaccagggcaagatgtttgatgaggag
agcatcctaggcgagctgagcgagccactgcgggaggagatcattaacttcacctgtcgg
ggcctagtagcccacatgcctctgtttgcccatgctgaccccagcttcgtcaccgcagtg
ctcaccaagctacgctttgaggtcttccagccaggagacctcgtggtgcgtgagggctcc
gtgggcaggaagatgtacttcatccagcatgggctgctcagcgtgctggcacgtggtgcc
caggacacccgcctcactgatggatcctactttggggagatctgcctgctgactcggggc
cggcgcacagccagcgtgagggctgacacctactgccgcctctactcactcagtgtggat
cacttcaatgctgtgctggaagagttccccatgatgcgacgggcttttgagaccgtggcc
atggatcgcctgcgccgcatcggcaagaagaattccatcctgcagaggaagcgctctgag
ccgagtcccagcagcagtggtggcatcatggagcagcatttggtgcaacacgacagggac
atggctcggggtgtccgtggcttggccccaggcacaggagcccggctaagtggaaaacca
gtgctgtgggagccactggtacatgccccccttcaagcagctgccatgacgtccaatgtg
gccattgccctgactcaccagcggggttctctgcccctctcccctgactctccagccact
cttcttgctcgctctgctcgccgctcggcaggatccccagcctccccactggtgcctgtc
cgagctggtcctctgctggccaggggaccttgggcatccacctcccgtctgcctgcccca
cctgcccgaacactccatgccagcctatcccgggctgggcgctcccaggtgtctctgctg
ggcccacccccaggaggaggtggaaggcggctaggaccccggggtcgcccactctcagcc
tcccaaccttctctgcctcaaagggcaacaggtgatggctctcctgggcgaaaagcttct
ggaagtgagcgtctgcccccctcagggctcctggccaagcctccagggacagcacaagca
cccaggtcatcagtgccagaaccagccaccccccggggcccccagctctctgccaacatg
tga
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