Dipodomys spectabilis (banner-tailed kangaroo rat): 122109598
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Entry
122109598 CDS
T07891
Symbol
Prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122109598 (Prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122109598 (Prpf3)
Spliceosome [BR:
dsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122109598 (Prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
122109598
NCBI-ProteinID:
XP_042538015
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All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTTSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKINKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtctaagagggagctggatgagctgaaaccatggatagaaaagacagtgaag
agagtgctgggtttctcagagcccactgtggtaacagcagcgttgaactgtgtggggaag
ggcatggacaagaagaaggcagctgaccatctgaaacctttccttgatgattctactctc
cgatttgtggacaaattgtttgaggctgtagaggaaggccgaagttctaggcattccaag
tccagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgactctgag
atctccaaggaatcatcaggagtaaagaaacgacgaataccccgttttgaggaggtagaa
gaagagccagaggtgattcctgggcctccatcagaaagccctggcatgttgactaaactc
cagatcaaacagatgatggaggctgcaacacgacaaattgaggagaggaaaaaacagttg
agcttcattagccctccgacacctcagccaaagacaacttcttcctcccagccagagcga
cttccaattggcaatactattcaaccatcccaggctgccacttttatgaatgatgccatt
gaaaaggcaaggaaagctgctgaactacaagcccgaatccaagctcagctggcactgaag
ccaggactaatcggcaatgccaacatggtgggccttgctaatctccatgccatgggcatt
gctccaccgaaggtagagttaaaagatcaaactaaacctacaccactgatcctagatgag
caaggtcgaactgtagatgccacaggcaaggagattgaactaactcatcgcatgcctact
ctgaaagccaatattcgtgctgtgaagagggaacaattcaagcaacagctaaaagaaaag
ccatcagaagacatggagtccaataccttttttgacccccgagtctcaattgccccctca
cagcgccagagacgtacttttaaatttcatgacaagggcaaatttgaaaagattgctcaa
cgattacgaacaaaggctcaactggagaagctacaggcagagatttcacaggctgctcga
aaaacaggcattcatacttcaactaggcttgccctcattgctcctaaaaaggaactaaag
gaaggagatatccctgaaattgagtggtgggactcttacataatccccaatggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
cccgcccaactcaatcctccagtagacaatgatacaccagttactctgggagtatatctt
accaagaaggaacagaagaaacttcggagacaaacaaggagggaagcacagaaggaacta
caggagaaagtaaggctaggcctgatgcctcctccagagcccaaagtgagaatttctaat
ttgatgcgagtattaggaacagaagctgttcaagaccctacgaaggtagaagcccatgtt
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccggaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacatatatctgtatatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcaactgtacctgacaggggtggtggtactgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggctcagaagaaatttaaacgcctcatgctgcat
cggataaagtgggatgaacagacatctaacacgaagggagatgatgatgaagagtctgat
gaggaagctgtgaagaaaattaacaaatgtgtattagtttgggagggtacagctaaagac
cggagctttggagagatgaagtttaaacagtgccccacagagaacatggctcgagagcat
ttcaaaaagcatggggctgaacactactgggacctcgcacttagtgaatctgtgttggag
tccactgattga
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