Dipodomys spectabilis (banner-tailed kangaroo rat): 122109630
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Entry
122109630 CDS
T07891
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00900
Terpenoid backbone biosynthesis
dsp01100
Metabolic pathways
dsp05164
Influenza A
dsp05166
Human T-cell leukemia virus 1 infection
Module
dsp_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122109630 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122109630 (Fdps)
05164 Influenza A
122109630 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dsp01006
]
122109630 (Fdps)
Enzymes [BR:
dsp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122109630 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122109630 (Fdps)
Prenyltransferases [BR:
dsp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122109630 (Fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
TilS-like
Motif
Other DBs
NCBI-GeneID:
122109630
NCBI-ProteinID:
XP_042538081
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MPLSRWLRSVGVFLLPAPCWVPQERWLCSLRRPSLVHWYPALGSWHGARCWCQVWTNELR
TFYSSLRMNGDQKSNAYAQEKQDFIQHFSQIVKVLTEDEIGHPETGDAIARLKEVLEYNA
IGGKYNRGLTVLVAFQELVEPKNQDADSLQRALTVGWCVELLQAFFLVSDDIMDASLTRR
GQTCWYKKPGIGLDAVNDALLLEACIYRLLKFYCREQPYYLNLIELFLQSSYQTEIGQTL
DLITAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILL
EMGEFFQIQDDYLDAFGDPSVTGKIGTDIQDNKCSWLVVQCLQRGTPEQRQILQENYGQK
DAKKVAQVKALYEQLDLPAVFLQYEEDSYSRLMSLIQQYAAPLPSTIFLGLANQIYKRKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcccgttggctgagatctgtgggggtcttcttgctgccagccccctgctgg
gtaccccaggagagatggctatgttccctacggaggccttctctggtgcattggtaccca
gccctggggtcctggcatggtgcccgctgctggtgccaagtgtggacaaatgagcttcga
acattttactcctctctcagaatgaatggagaccagaaatctaatgcttatgcccaagag
aagcaggatttcatccagcacttctcccagattgtcaaggtgctgactgaggatgagata
gggcacccagagacaggagatgccattgcccggctgaaggaggtcttggagtacaatgcc
attggaggcaaatacaatcgcgggttgacggtgctggtcgcattccaggagctggtggag
ccaaagaatcaagatgctgacagtctccagcgggccctgactgtgggctggtgtgtggag
ctgcttcaagctttcttcctggtgtcagatgacatcatggacgcttccctcactcgcagg
ggacagacttgctggtataagaagccgggcataggtttggatgcggtcaatgacgctctg
ctcctggaagcatgtatctaccgcctgctgaagttctattgccgggagcagccatactat
ctgaacctgattgagctcttcctgcagagttcctatcagaccgagattgggcagaccctg
gacctcattacagctccccagggccatgtggatcttggcagatacactgagaaacggtat
aaatctattgtcaagtacaagacagccttctactccttctacctgcccgttgcggctgcc
atgtacatggcaggcattgatggagagaaggaacatgccaatgccaagaagatcctgctg
gagatgggagaattctttcagatccaggatgattaccttgacgcctttggggaccccagt
gtgacaggaaagattggcactgatatccaggacaacaaatgcagctggctggtggttcag
tgtctgcaacggggcactccagaacagcgccagattttgcaggaaaattacgggcagaag
gacgccaagaaggtggctcaggtgaaggcactttacgagcagctggacctgccagctgtg
ttcttgcagtatgaggaagacagttacagccgccttatgagtctcatccaacagtatgct
gcacccctgccatctaccatcttcttggggctagccaaccagatttacaagcggaaaaag
tga
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