Dipodomys spectabilis (banner-tailed kangaroo rat): 122109702
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Entry
122109702 CDS
T07891
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04659
Th17 cell differentiation
dsp04710
Circadian rhythm
dsp05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
122109702 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
122109702 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
122109702 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122109702 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dsp03310
]
122109702 (Rorc)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122109702 (Rorc)
Nuclear receptors [BR:
dsp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122109702 (Rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7222
Motif
Other DBs
NCBI-GeneID:
122109702
NCBI-ProteinID:
XP_042538200
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MDRAPQRHHRASRELLATKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQQQQQQEQVAKTPPVGGHGADILTYTLGLPDGQLPLGASPDLPEASACPPGLL
RASGSGLPYSNNLAKTEPKGASCHLEYSPQRAKAETRESISSRNSQITPGKCGLPLEGPR
HSGFGDPGQGPDSYCSPNICSTPEAPYASLTEIEHLVQNVCKSYRETCQLRLEDLLRQRN
NLFSREEVTSYQRKSIWEMWERCAHRLTEAIQYVVEFAKRLAGFMELCQNDQIVLLKTGA
MEVVLVRMCRAYNADNHTVFFEGKYGGMELFRALGCNELISSIFDFSHSLSALRFSEDEI
ALYTALVLINANRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQGILAKLPPKGKLRSLCS
QHVEKLQIFQHLHPIVVQAAFPPLYKELFSTELESPEGLSK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgagcctcaagggagctgctggctacaaagaag
acccacacttctcaaattgaagtgatcccttgcaaaatctgtggggacaagtcttctgga
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgtcggagccagcag
tgtaatgtggcctactcctgcacccgtcagcagaattgccccatcgaccgcaccagccgt
aaccgatgccagcactgccgtctgcagaagtgcctagcactgggcatgtcccgagatgct
gtcaagtttggccgcatgtccaagaagcagagagacagcctgcatgcagaagtgcagaaa
caactccagcagcagcagcagcagcagcagcagcaacaggaacaagtagccaagactcct
ccagtagggggccatggagcagatatcctcacctataccttggggctcccagatggccag
ctgcccctcggtgcctcacctgacctgcctgaagcctctgcctgtcctcctggtctcctg
agagcctcaggctctgggctgccatattctaacaacttggccaagacagagcccaaaggg
gcctcctgccaccttgagtacagccctcagagggccaaggctgagactagagagagcatc
tctagcagaaacagccagattactcctggaaaatgtggacttcctttggaggggcccagg
cactctgggtttggggatccaggacagggtccagacagctactgcagccccaatatctgc
agtaccccagaggcaccgtatgcctctctgacagagatagaacatctagtacagaatgtc
tgcaagtcctaccgagagacatgtcagttgcggctggaagacctactacggcagcgtaat
aacctcttctcccgggaggaggtgaccagctatcagagaaagtctatatgggagatgtgg
gagcgctgtgcccaccgcctcactgaagccattcagtatgtggtcgagtttgccaagcgg
ctcgcaggcttcatggagctctgccagaatgaccagatcgtactactgaaaacaggagca
atggaggttgtgctggtcaggatgtgccgggcctacaatgctgataatcatacagtcttt
tttgaagggaaatacggtggcatggagctgtttcgagccttgggctgcaatgagctcatc
agctccatcttcgacttctcccactccctcagtgccttgcgcttttccgaggatgagatt
gccctctacactgcccttgttctcatcaatgccaacagaccagggctccaagagaaaagg
aaagtggagcagctgcagtacaatctggagctagccttccatcatcatctctgcaagacc
catcgccaaggcattctggcaaagctgccacccaaagggaagctccggagcctgtgcagt
cagcatgtagaaaaactacagatcttccaacatctccaccccattgtggtccaagctgct
ttccctccgctctacaaggaactcttcagcactgaactcgagtctcctgaggggctatcc
aagtga
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