Dipodomys spectabilis (banner-tailed kangaroo rat): 122110019
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Entry
122110019 CDS
T07891
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04066
HIF-1 signaling pathway
dsp04137
Mitophagy - animal
dsp04140
Autophagy - animal
dsp04148
Efferocytosis
dsp04659
Th17 cell differentiation
dsp04919
Thyroid hormone signaling pathway
dsp05167
Kaposi sarcoma-associated herpesvirus infection
dsp05200
Pathways in cancer
dsp05205
Proteoglycans in cancer
dsp05208
Chemical carcinogenesis - reactive oxygen species
dsp05211
Renal cell carcinoma
dsp05230
Central carbon metabolism in cancer
dsp05231
Choline metabolism in cancer
dsp05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
122110019 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122110019 (Hif1a)
04137 Mitophagy - animal
122110019 (Hif1a)
04148 Efferocytosis
122110019 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
122110019 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
122110019 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122110019 (Hif1a)
05205 Proteoglycans in cancer
122110019 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
122110019 (Hif1a)
05230 Central carbon metabolism in cancer
122110019 (Hif1a)
05231 Choline metabolism in cancer
122110019 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
122110019 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
122110019 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
122110019 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122110019 (Hif1a)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122110019 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
122110019
NCBI-ProteinID:
XP_042538437
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MEGAGGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDVEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
ILKPVESSDMKMTQLFIKVEPEDTGSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE
TEDQQLEEVPLYNDVMFPSSNEKLSTINLAMSPLPASESPKALRSNADPALNEEVALKLE
PNTESLELSFTMPQIQDQPASPTDGSSRQSSPEPNSPSEYCFDVDSVFKLELVEKLFAED
TEAKNPFSSQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENNSSMNTVTVFQPTPLQEP
AINTTTATATATDELKTVTKDGMEDVKILLVSPSPTHVPKETTSDTTSSSSSYSGTQSRT
VSPNIAGNGVIEQTEKSHPRSPNVVSVILSQRNTVPEEELNPKIIALQNAQRKRKMEHDG
SLFQAVGIGTLLQQADDQTTTTSLSWKRVKGCKSSEPNGVEQKTIILIPSDLACRLLGQS
MDESGLPQLTSYDCEVNAPIQGSRNLLQGEDLLRALDQVN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaagaataggataagttctgaacgccgaaaa
gagaagtccagagatgcagctagatctcggcgaagcaaagagtcggaagtattttacgag
cttgctcatcagctgccacttccccataacgtgagctcacatctggataaggcttctgtt
atgaggcttaccatcagctacttgcgtgtgagaaaacttcttgatgctggtgatctggac
gttgaagatgagatgaaggcccagatgaactgcttttatctgaaagcccttgatggcttt
gttatggtgctaacagatgatggcgacatgatttacatttctgataatgtaaacaaatac
atggggttgactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgctcacacacagaaatggccctgtgaaaaagggtaaa
gaacaaaatacacaacgaagcttttttctcagaatgaagtgtaccctaactagccgaggg
agaactatgaacataaagtctgcaacgtggaaggtacttcactgcacaggccacattcat
gtgtatgataccaacagtaaccagcctcagtgtggatataagaaaccacccatgacctgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagt
aagacttttcttagtcgacacagcctggatatgaagttttcttattgtgatgaaagaatt
actgaattgatgggatatgagccagaagaacttttgggtcgctcaatttatgagtattat
catgcattggactctgatcatctgaccaaaactcaccatgatatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggctatgtctgggttgaaact
caagcaactgttatctataataccaagaactctcaaccacaatgtattgtgtgtgtgaat
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
atcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcatcaaagttgag
ccagaggatacaggcagcctctttgataaacttaaaaaggagccggatgctttaactctg
ctggccccagctgctggagacacaatcatatctctagattttggaagcaatgacacagaa
actgaagaccaacaacttgaggaagttccattatacaatgatgtaatgttcccctcatct
aatgaaaaactgtcaactataaacttggcgatgtctccattacctgcctctgaaagtcca
aaggcacttcgaagtaatgctgaccctgcactcaatgaagaagttgcattaaaattagaa
ccaaatacagagtcactggaactttcttttaccatgccccagattcaggatcagccagca
agtcctactgatggaagcagtagacaaagttcacctgagccaaacagtcccagtgagtat
tgttttgatgtggacagtgtattcaagttggaattggtagagaaactttttgctgaagac
acagaggcaaagaatccattttcgagtcaggacactgatttggacttggagatgctggcc
ccctacatcccaatggatgatgacttccagttacgttcctttgatcagctgtcaccatta
gaaaacaattctagtatgaacacagttacagtcttccagccgactccactgcaagaacct
gccattaacaccaccactgccactgccactgccactgatgaattaaaaacagtgacaaaa
gatggtatggaagacgttaaaatattgcttgtatctccatctcctacccacgtacctaaa
gaaactactagtgacacaacatcatcatcatcatcttatagtggtactcaaagtcggaca
gtctcaccaaacatagcaggaaatggagtcatagaacagacagaaaaatctcatccaaga
agccctaacgtggtatctgtcattttgagtcaaagaaatactgttcctgaggaagaatta
aatccaaagataatagctttgcagaatgcgcagagaaaacgaaaaatggaacatgacggc
tcactttttcaagcagtaggaattggaacattattacagcaagcagatgaccaaacaact
actacatcactttcctggaaacgtgtaaaaggatgcaagtctagtgaaccaaatggagtg
gagcaaaagacaattattttaataccctctgatttagcatgtagactgctggggcaatca
atggatgagagtggattaccacagctgaccagctatgattgtgaagtgaacgcccccata
caaggcagcagaaaccttctacaaggggaagacttactcagagctttggatcaagttaac
tga
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