Dipodomys spectabilis (banner-tailed kangaroo rat): 122110303
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Entry
122110303 CDS
T07891
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122110303 (Dscaml1)
Cell adhesion molecules [BR:
dsp04515
]
Immunoglobulin superfamily
DSCAM family
122110303 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
122110303
NCBI-ProteinID:
XP_042538773
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSTVQEYVSVVSWEKDTVSISPGNRFFITSHG
GLYIADVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTG
RTVELPCTASGYPIPAVRWLKDGRPLPADSRWTKRITGLSISDLRTEDSGSYICEVTNTF
GSAEATGTLTVIDPLHVSLTPKKLKTGIGSTVILSCALTGSPEFSIRWYRNTELVLPDEA
ISIRGLSNETLLITSAQKSHSGAYQCFATRKSQTAQDFAIIVLEDGTPRIISSFSEKVVN
PGEQFSLMCAAKGAPPPTLTWALDDESIVRDGGHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQTVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKA
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDTWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMGVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPA
VKWTKDSEDSAIPMALDGHRLIHSNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSEDNSEEWKDVLISSGERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWNHGGCPITAILLEYRPKGGWAWQSLRANSSAEVFLTELREATWYELRMRACNSAGCS
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPC
PVVPPREASIRNLARTYHPQARHLTLDPASKPLGLPHPGTATATTTATLPQRTLAMPAPP
AGTAPPAPGPAPPEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRAQK
QGAGAYSKSYTLV
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccctgaggat
gtcggcaccagcctctactttgtaaatgactccctgcagcaggtgactttctccagctcc
gtgggggtggtggtgccctgcccggccgcgggctcccccagcgcggcccttcgatggtac
ctggccacgggggacgacatctacgacgtgccccacattcggcacgtgcacgccaacggg
acgctgcagctctaccccttctccccctccgccttcaatagcttcatccacgacaatgac
tacttctgcaccgcggagaatgctgcgggcaagatccggagccccaacatccgcgtcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggaaac
gtggcggtcttcaagtgcctcattccctctacagtgcaggaatacgttagcgttgtatcc
tgggagaaagacacggtctccatcagcccaggaaataggttttttatcacttcccacgga
gggctgtacatcgctgacgtgcaaaaggaggacgccctctccacctaccgctgcatcacc
aagcacaagtacagcggagagaccaggcagagcaacggggcccgcctctccgtgaccgac
cccgccgagtccatccccaccatcctggacggcttccactcccaggaagtgtggactggc
cgcacggtggagctgccctgcacggcctcaggctaccccatccctgccgtccgctggctc
aaggacggacggcccctccccgcagacagccgctggaccaagcgcatcacagggctgagc
atcagcgacctgcgcacggaggacagcggcagctacatctgtgaagtaaccaacaccttc
ggctcggcagaggccacgggcaccctcacggtcatcgacccccttcacgtgagcctgaca
ccaaagaagctgaagacgggcatcggcagcacggtcatcctgtcctgcgccctcacgggc
tccccggagttcagcatccgctggtaccggaacacggagctggtgctgcccgacgaggcc
atctccatccgagggctcagcaacgagaccctgctcatcacctcggcccagaagagccac
tcgggggcctaccagtgctttgccacccgcaagagccagacggcccaggacttcgccatc
attgtgctggaggacggcacgcctcgcatcatctcgtccttcagcgagaaggtggtgaac
cctggggaacaattctccctgatgtgcgcggccaagggcgccccgccccccacgctcacc
tgggccctggatgacgagtccatcgtgcgggacggaggccaccgcaccaaccagtacacc
atgtccgacggtaccaccatcagccacatgaacgtcacgggcccccagatccgagatggg
ggtgtttaccggtgcaccgcgcggaactcggtgggcagtgctgaatatcaggcacgaata
aacgtaagaggaccccccagcatccgggcgatgaagaacatcacagccgtggccggaaga
gacaccctcatcaactgcagggtcattggctacccctactactccatcaagtggtacaag
gacgccctgctgctgccggacaaccaccggcaggtggtgttcgagaacgggaccctgaag
ctgacggacgtgcagaagggcatggacgagggggagtacctgtgcagcgtcctcatccag
ccccagctctccatcagccagacggtgcacgtggctgtcaaagtgccccctctgatccag
cccttcgagtttccacccgcctccatcggccagctgctctacatcccctgtgtggtgtcc
tcgggggacatgcccatccgcatcacgtggaggaaggatggacaggtgatcatctccggc
tcgggtgtgaccatcgagagcaaagagttcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacttgcatcgccagcaacgcagcggccaccgtgagccgg
gagcgccagctcatcgtgcgtgtgcctcctcgattcgtggtgcagcccaacaaccaggac
ggcatctacggcaaagctggggtgctcaactgctcggtggacggctacccaccccccaag
gtcatgtggaagcacgccaaagggagcgggaacccccagcagtaccaccccgtgcccctc
accggccgcatccagatcctgcccaacagctccctgctgatccgccacgtcctagaagag
gacatcggctactacctctgccaggccagcaacggcgtgggcaccgacatcagcaaggcc
atgttcctcaccgtcaaaatcccagccatgatcacctcccaccccaacaccaccatcgcc
atcaagggccacgcgaaggagctgaactgcacggcgcgcggggagaggcccatcatcatc
cgctgggagaagggggacaccgtcatcgaccccgacagggtcatgcggtacgccatcgcc
accaaggacaacggggacgaggtggtctccacgctgaagctcaagccagctgaccgtggg
gactctgtgttcttcagctgccacgccatcaactcgtacggggaggaccggggcttgatc
cagctcactgtgcaagagcctcctgaccctccagagctggagatccgggaggtgaaggcc
cggagcatgaacctgcgctggacccagcgattcgatggcaacagcatcatcacgggcttc
gacatcgaatacaagaacaaatcagatacctgggacttcaagcagtccacacgcaacatc
tcccccaccatcaaccaggccaatatcgtggacctgcacccggcgtccgtgtacagcatc
cgcatgtactcgttcaacaagatcggccgcagcgagcccagcaaggagctcaccatcagc
acagaagaggcggctcccgacgggccccccatgggtgtcaccctgcagccagtcacttcc
cagagcatccaagtcacctggaaggcccccaagaaggagctccagaacggagtcatccgg
ggataccagatcggctaccgggagaacagccctggcagcaacgggcagtacagcatcgtg
gagatgaaggccacgggggacagcgaggtctacacgctggacaacctcaagaagtttgcc
cagtatggggtagtggtccaagccttcaaccgggctggcacggggccttcgtccagtgag
atcaatgccaccaccctggaggacgtgcccagccagccccctgagaacgtccgggccctg
tccatcacttccgacgtggctgtcatctcctggtccgagcccccccgcagcaccctcaac
ggcgtcctcaaaggctatcgggtcatcttctggtcgctctacgtggatggggagtggggt
gagatgcagaacatcaccacgacgcgggagcgggtggagctgcggggcatggagaagttc
accaactacagcgtccaggtgctggcctacacgcaggcgggcgacggggtccgcagcagc
gttctctacatccagaccaaagaggacgtaccaggtccccccgccggcatcaaggctgtc
ccttcttcagccagcagtgtggtggtgtcttggcttcctcccaccaagcccaatggagtg
atccgcaagtacaccatcttctgctccagccccgggtctggccagccggctcccagcgag
tatgagaccagcccagagcagctcttctaccggatcgcccacctgaaccgcgggcagcag
tacctgctctgggtggccgccgtcacctcagccggccggggcaacagcagcgagaaggtc
accatcgagccagccggcaaagccccagcaaagatcatctccttcggaggcaccgtgacc
acgccctggatgagagatgtccggctaccttgcaattcggtgggagacccggcccccgct
gtgaagtggacgaaggacagtgaggactcagccatcccgatggccctggatggccaccgg
ctcatccactccaacggcaccttgctgctgcgcgccgtgaaggccgaggactccggctac
tacacctgcacggccaccaacaccggcggctttgacaccatcatcgtcaatcttctggta
caagtgcccccggaccagccccgcctcacggtctccaaaacctcagcttcctccatcacc
ctgacctggatcccaggtgacaacggaggcagctccatccgaggcttcgtgctgcagtac
tccgaggacaacagcgaggagtggaaggacgtgctcatcagctccggcgagcgctccttc
aagctggacagcctcaagtgcggcacgtggtacaaggtgaagctggccgccaagaacagc
gtgggctccggacgcatcagcgagatcatcgaggccaagacccacgggcgggagccctcc
ttcagcaaagaccaacacctcttcacccacatcaactccacacacgctcggcttaacctg
cagggctggaaccacgggggctgtcccatcacagccatcctgctggagtaccggcccaag
ggcggctgggcctggcagagcctgcgggccaacagctcggcagaggtgtttctcaccgaa
ctgcgggaggccacgtggtacgagctccgcatgagggcttgcaacagtgcaggctgcagc
aacgagaccgcccagttcgccaccctggactacgacggcagtaccatcccacccatcaag
tccgctcaaggtgagggggatgatgtgaagaagctgttcaccatcggctgcccggtcatc
ctggccaccctgggagtggcactgctcttcatcgtgcggaagaagaggaaggagaagcgg
ctgaagcggctccgagatgcaaagagtttggcagaaatgttgataagcaagaataacaga
agctttgacacccccgtgaaagggcctccacagggcccgcggctgcacattgacattccc
agggtccagctgctcattgaggacaaggagggcatcaagcagctgggagatgacaaagcc
accatccccgtgacagacgcggagttcagccaagccgtcaacccacagagcttctgtacc
ggcgtgtccctgcaccaccctgccctcatccagagcactgggccgctcatcgacatgtct
gacatccggccgggcaccaacccagtatccaggaagaatgtgaaatcggcccacagcacc
cggaaccggtactccagccagtggaccctgaccaagtgccaggcctccacgcctgcgcgc
acgctcacctccgactggcgcaccgtgggctcccagcatggcgtgaccgtcaccgagagt
gacagctacagtgccagcctgtcccaggacacagacaaagggcggaacagcatggtgtcc
acggagagtgcctcttccacctacgaggagctggcccgggcctacgagcacgccaagctg
gaggagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctcagacagttcc
tccgaccagatgaccaccggcaccaacgagaatgctgacagcatgacatccatgagcacg
ccctccgagccgggcatctgccgcttcaccgcctccccgcccaagccccaggacgccgac
cggggcaagaatgtggccgtgcccatccctcaccgggccaacaaaagtgactactgcaac
ctgcccctgtatgccaagtcggaggccttcttcagaaaggcagacggcagagagccctgc
ccggtggtcccgccccgggaggcctccatcaggaacctggctcgaacctaccacccccag
gcccgccacctgactctagaccctgccagcaagcccttgggcctcccccacccgggcacc
gctactgcgaccaccacagccaccttacctcagaggactctggccatgccggcgcccccg
gcgggcacggcgccccccgcccccggccccgcccccccggagcccccgacggcccccagc
gctgcccctccagcccccagcaccgagcctccgcgggctgggggcccacacaccaaaatg
gggggctccagggactcactcctcgagatgagcacatcgggggttggacgggctcagaag
cagggggctggggcctactccaaatcctacaccctggtgtag
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