Dipodomys spectabilis (banner-tailed kangaroo rat): 122110331
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Entry
122110331 CDS
T07891
Symbol
Ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsp03009
]
122110331 (Ddx10)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122110331 (Ddx10)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
90S particles
Helicases
122110331 (Ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
122110331
NCBI-ProteinID:
XP_042538813
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MGKTPKDLGSGARPDPVRSFNRWKKKHSHRQNQKKQLRKQLKKPEWQVEREGISRLVQSY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAALIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELHQK
ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEGGEALLILL
PSEEQEMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKKVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQNKPTKESVRSQGDDVIESRAPS
LTNDEVEEFRAYFSEKMSILQKGGKSLRGSDCRVASDSSNEEEEGEEEEEEEEEEEEKED
DKMKEKLGKARGSQTESVPSTDKVKKVKEVPVQFLSGGDEEEEDGPDADFLTVKRRDVFG
LDLKENKALPKKEPSKASVKKKLTKVAEAKKVMKRNFKVNKKITFTDDGELVQQWPQVQK
STTKDSEEEDDAGGINLEKAKERLQEEDKFDKEEYRKRIKAKHREKRLKEKEARREANKK
QAKAKDEEEEAFLDWSDDDDVGFDPSTLPDPDKYRSSAESDSEYMENNISDTKKQQGMRK
RNNNEAEDMGPTSHHRKKAKWEASEPLDTGLSLAEDEELVLHLLKNQS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactccgaaggacttgggctcgggagcccgacccgacccggtgaggagcttc
aatcgctggaagaaaaaacacagccataggcagaaccaaaagaagcagttgaggaagcag
ctgaagaagcccgagtggcaggtggagcgcgagggcatcagccgtctggtgcagagctac
gagaagataaatgtgaatgaaattacaagattttcagatttccccttgtctaaaaagaca
ttgaaaggtttacaggaagcccagtaccgcttggtaacagagatacagaagcagacgatt
gggttggctttgcaaggcaaagatgtgcttggagctgccaaaactggatctggcaagact
ttggctttccttgttccagtgttggaagccctataccgtctacagtggacatcaacagat
gggctgggtgttctgataatatcacctaccagagagctggcctatcagacttttgaggtt
ctccgaaaagtagggaagaatcatgacttttcagctgctctcatcattggtgggaaggat
ctgaaacatgaagctgaaaggatcaacaacataaatatacttgtttgcacaccaggtcgg
cttcttcaacacatggatgaaacaatatgttttcatgctaccaatcttcaaatgctagtt
cttgatgaagcagatagaatcttggatatgggctttgctgatactatgaatgctattatt
gaaaatcttcctaagaaacgtcagactttacttttctcagccacacaaaccaaatctgta
aaggaccttgcacgcttgagtttgaaaaaccctgagtatgtgtgggttcatgaaaaagca
aaatacagtactccagctactttggagcagaactacatagtttgtgagctacatcaaaag
ataagtgtgctctactcctttttgagaagccacctgaagaagaagagtattgtctttttc
tccagttgcaaagaggtgcagtacctgtaccgagtgttctgccggctccgtcccggaatt
tctatccttgctctccacggccgacagcagcagatgagaagaatggaagtctacaatgag
tttgtccgcaagagagctgcggtactctttgctactgatattgcagcccgagggctggat
ttcccggctgttaattgggttcttcagtttgattgtccagaggatgccaacacatatatt
cacagagcgggtagaactgccaggtacaaagagggtggtgaggcacttttaattctgctt
ccttcagaagagcaagagatggtacagcagcttctccagaagaaagtacctgtgaaggaa
atcaaaatcaatccagaaaagcttatagacgtccagaaaaaattggaatcctttttagct
caagatcaagatttgaaagaaagagctcaaaggtgttttgtctcctacatacgttcagta
tatcttatgaaggataaaaaagtatttgatgtaagcaagttacctattcctgaatatgca
ttatctcttggtcttgctgtggcacctcgggtaagatttcttcagaaaatgcagaacaag
cccaccaaagaatctgtaaggagccaaggcgatgatgtcattgagtccagagctccttcc
ctcaccaatgatgaagtggaagaatttagagcctatttcagtgagaaaatgtccatactt
cagaagggtgggaagagtctcagaggatcagactgcagagtggctagtgatagtagcaat
gaagaagaggaaggggaggaggaggaggaagaggaagaggaagaagaagagaaggaggat
gacaaaatgaaagagaaattaggaaaagcaagaggatctcagactgaatctgttcccagt
actgacaaggtaaagaaggtcaaggaagttcctgtgcagttccttagcggtggagatgaa
gaggaagaagatggacctgatgctgatttccttacagtgaagcggcgtgatgtatttggg
ttggatcttaaagagaataaagcattaccgaagaaagaaccttctaaagccagtgtcaag
aaaaaattaaccaaagttgctgaagcaaaaaaagtaatgaagagaaattttaaagtgaat
aagaagataacctttactgatgatggagagttggttcagcagtggccacaagtacagaaa
tctaccacaaaggattcagaggaggaagatgatgctggtggtatcaacttagaaaaagca
aaggaaagacttcaggaagaggacaagtttgacaaagaagaatacaggaagaggattaag
gcaaagcatcgggagaaaagactgaaagaaaaggaagccagaagagaagccaacaagaaa
caagcaaaggctaaagatgaagaagaagaagcctttctggattggagtgatgatgatgat
gttggatttgatccaagcacccttccagatccagataagtacagaagttctgcagaatca
gatagtgaatacatggaaaacaatataagtgataccaagaaacagcaaggaatgaggaaa
aggaacaacaatgaagcagaagacatgggaccaacaagtcatcatagaaagaaggccaag
tgggaagcctcagagcctttggatacaggcctttccttagcagaagatgaagaactggtg
ttgcatctgcttaaaaatcaaagttaa
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