Dipodomys spectabilis (banner-tailed kangaroo rat): 122110410
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Entry
122110410 CDS
T07891
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04270
Vascular smooth muscle contraction
dsp04360
Axon guidance
dsp04611
Platelet activation
dsp04625
C-type lectin receptor signaling pathway
dsp04810
Regulation of actin cytoskeleton
dsp05135
Yersinia infection
dsp05152
Tuberculosis
dsp05163
Human cytomegalovirus infection
dsp05200
Pathways in cancer
dsp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122110410 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
122110410 (Arhgef12)
04625 C-type lectin receptor signaling pathway
122110410 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
122110410 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
122110410 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122110410 (Arhgef12)
05205 Proteoglycans in cancer
122110410 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
122110410 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
122110410 (Arhgef12)
05152 Tuberculosis
122110410 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122110410 (Arhgef12)
Membrane trafficking [BR:
dsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122110410 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
122110410
NCBI-ProteinID:
XP_042538947
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSAIGHMSPIMSSPHSPG
ASGNMERITSPVLVGEENNVVHNQKVEILRKMLQKEQERLQFLQEDYNRTPAQKLLKEIQ
EARKHIPQLQEQLSKATGSAQDGAVVTPSRPLGDALTVSEPDMDPGDGPYRTDWSGGDTS
RPGSDNADSPKSGLKERIYLEENPEKSESIQDIDAPLLVSSPSTRVAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRAAHLKVSVPEEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLADSELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQATEEEK
SSTMQYVILMYMKHLGVRVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKARHPKHVSTASSVSLDPQDSAKLRQTGSANEGADAGC
LPANPMSSVVSGAALPQEGGKENDMGSKQVGETPVSGDSLDGTPRPANTVFDFPPPPLDQ
VQEEECEVERVTEHGTPKPFRKFDSTAFGESQSEDEQFENDLETDPPSWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSEIRKIFSNLEDILQ
LHIGLNEQMKAVRKRSETSVTDEIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPESHPCEGDNDEEEPPRLEVERRDISAPGQQSPDRDLGLEPPLISSKPQCHSLSPG
EKSEADEVFVTAAQLAKEQCAEALKESGGSHELTHTDPHLLVSNERWALDALRNLGLLKQ
LLVQQFVLTEKSLQEDWQHFPSHKPASQGVQAEGGVQNSEHIKAYHPGDGQVSFTTGTGD
FATCRSPRTSTESSAPPDSIVLASQESQASNILVMDPMILTPAAPATESEGGPDESGEHF
FDAREAHGEDNLPEGDGAEAKEEKDVTLRISGNCLILDGYEAVQESSTDEEVMSSFALQP
GLGLPSADSPHQQHPSPQSAHSDGAASPFTPEFLGRRRWGTLEGSCFEIQSPCCTDSQSQ
ILEYIHKIEADLEHLKKVEESYCILCQRLAGSALTEKHSDQS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgaacgcagtaca
tcacatgattttgaccctacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatcggagatatatggtcttgttcagcggtgtgtgatcatccagaaagatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggtgtgcagacaggtgatcggatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaggtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccaaattccccttgctgattctgaa
gtagagccatcggccattggacatatgtctcccatcatgtcttcccctcattcacctgga
gcatctgggaacatggagaggatcaccagtcctgtgctggtgggggaagaaaacaatgtg
gttcataaccagaaagtagaaatcttgagaaaaatgttacagaaagaacaggaacggcta
cagttcttgcaggaagactataaccgaacacctgcccagaagttgctaaaagagatccaa
gaggccaggaagcacattcctcagctacaagagcagttatccaaagccacaggctctgcg
caggatggagctgtagtgacaccttccaggcctctaggggatgccctaacagttagtgaa
cccgacatggatcctggagatggaccttataggactgactggagcggtggagatacttct
cggcctggcagcgacaatgcagatagtcctaagagtggtctgaaggagaggatttatcta
gaggaaaacccagaaaaaagtgaatcaattcaggacattgatgctccattgctcgtcagc
agcccttccacccgggtcgcgcctcatatcattggggcagaggatgatgattttggtact
gaacatgaacagatcaatgggcagtgcagctgcttccagagcattgaactgctgaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcacaatttgaccccgcaaca
ttgctctgttacctctactcagacctgtataaacagactaattcgaaggaaactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgggctgcgcacctgaaagtctctgtt
cctgaggaaatatcggtggatctagaaaagagaagacctgagcttattcctgaggatcta
catcgccactatatacaaactatgcaagaaagagtccaccctgaagttcagaggcacttg
gaagattttcggcagaaacgcagtatggggctgaccttggctgacagtgagctgactaaa
cttgatgcagagcgagacaaggaccgggtaactctggagaaggaacgggcatgtgcagag
cagatcgttgctaaaattgaagaagtattgatgactgctcaagctacagaagaagaaaag
agttccacaatgcagtatgtgattctcatgtatatgaagcatttgggagtcagagtgaaa
gaacctcgaaatttggagcacaagcggggtcggattggattcctcccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgaagagaaaggcaagcggaggggattccccagcatc
ctgggacctccaaggagaccaagccggcatgataacagtgcaattggcagggccatggaa
ctacagaaagcacgccaccctaagcacgtgtccacagcctcatctgtgagtcttgaccct
caggattcagccaagttgcgccagactgggtcagccaatgaaggagcagatgctggatgc
ctgcctgccaatcccatgtcctctgtggtttcaggggctgctctcccacaggaaggaggg
aaagagaatgacatgggatcaaaacaagttggagaaacaccagtatctggagactccttg
gatggcacacctcggcctgccaacactgttttcgatttcccacctcctcccttagaccaa
gtgcaggaggaggaatgtgaagtggaaagagtgacggaacatggaacaccaaagcccttt
cgaaagtttgacagcacagcctttggagaaagtcaaagtgaggatgagcaatttgaaaac
gacctggagactgacccacccagctggcagcagcttgttagccgagaagtgttactggga
ctgaagccctctgagatcaaaagacaggaagtgattaatgaattgttctacacagaaaga
gctcatgtccgaacactgaaggttcttgatcaagtgttctatcagcgagtgtccagggaa
ggaattctgtcaccttcagagatccggaagattttttcaaacctggaagatattcttcaa
cttcacattgggttgaatgagcaaatgaaggctgttcgaaaaaggagtgagacctctgtg
acggatgaaattggagaagatttactcacctggttcagtggaccaggagaggagaagttg
aaacacgctgctgctaccttttgcagcaaccagccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcggttccagacttttgtgcaagatgctgagagtaaccctctg
tgtcgccgccttcagctgaaggacatcattcccacccagatgcagaggcttacgaaatac
ccacttcttctggataacatcgccaagtacacagaatggccaacagaaagggaaaaagtg
aagaaagctgcggatcactgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaagcagcgcctagaagattatcagcgtcgccttgatacctccaatctcaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacgaaaagaaagatg
attcatgaagggcccttggtttggaaggtgaatagagataaaactatcgatctatataca
ttgctgctggaagacatccttgtattgctacagaagcaggatgatagactggtgctgagg
tgtcacagcaagattctggcatccacagctgacagtaaacacactttcagtcccgtcatc
aagctgaacacagtgttagttcgacaagtggcaacagataacaaagccttattcgtcatc
tccatgtcagacaatggagcccaaatttatgaattggtggcacagacagtttctgaaaag
actgtctggcaggaccttatctgccgaatggctgcgtcagtgaaggagcagtctacgaag
ccgatccccctcccggagtcacacccgtgcgaaggagacaatgatgaggaagaaccaccc
agattagaagtggagcgccgcgacatctcagcccctggccagcagagcccagatagagat
ttgggtctagaacctcccttaatctcatcaaaacctcagtgtcattcactgagtcccggt
gagaagtcggaggcagatgaagtgtttgtgactgcagcacagctggcaaaggagcagtgt
gcagaggccctgaaggaaagtggagggagccatgagctcacgcacacagatccacacctg
ctggtctcaaatgagcggtgggctctggatgcactcaggaatttgggtttgttgaagcaa
ttgctggtacaacagtttgtcttgaccgagaagagtcttcaggaggactggcagcacttc
ccaagccacaagccagcgtctcagggggtgcaggcagagggtggagtccagaactcagaa
cacatcaaggcctatcatcctggtgatggacaggtgtcctttacaactggaactggtgac
tttgccacttgtcgcagtccacggacttcaactgaatcttctgctcccccagattcaata
gtgttggcatcccaagagagccaggcaagtaacattttagtaatggaccccatgattctg
accccagcagcaccggccacggagtcggaagggggtcctgatgagagtggagagcacttt
tttgatgcccgtgaagcccatggtgaggataacctaccagaaggcgatggagcagaggcg
aaggaggagaaggatgttaccttgcgcatctcaggaaactgtttaatcctcgatggctat
gaagcggtgcaggagagctccacagatgaggaggtcatgtcgtccttcgccctgcagcct
gggctgggcctgccctctgcggactccccccatcagcagcacccctctccccagagcgct
cattctgatggagcagcttcaccattcaccccggaattcctgggccgtcggcgctggggg
actttggagggctcctgttttgagatccagagtccctgttgtacagattcacagagtcag
atcctggaatatattcataagatagaggctgaccttgaacacctaaagaaggtggaggaa
agctactgcattctttgccaaaggctggctggctcagccctcacagaaaagcactcagat
caaagttaa
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integrated database retrieval system
