Dipodomys spectabilis (banner-tailed kangaroo rat): 122110455
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Entry
122110455 CDS
T07891
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19
KO
K16499
protocadherin delta 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122110455 (Pcdh19)
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122110455 (Pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122110455
NCBI-ProteinID:
XP_042538996
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTIVKADDYDEGEN
GRVTYDMTEGDRGYFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEQQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDH
NT seq
2848 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactcctgctgccggtgctgctgctgttggcagtactgtggacccaggcggcc
gccctcattaacctcaagtactcagtagaagaggagcagcgcgctgggacagtgatcgct
aacgtggccaaggacgcgcgagaggcgggcttcgcgctagacccccgccaggcttctgcc
tttcgcgtagtgtccaactctgctccgcacctggtggatatcaaccccagctccggcctg
ttggtcacgaagcaaaagatcgaccgtgacctactgtgccgccagagccccaagtgcatc
atctcgctggaggtcatgtccagctcaatggagatctgtgtgattaaggtggagatcaag
gacctgaacgataacgcacccagtttcccggctgcgcagatagagctagagatctcggaa
gccgccagtccgggcactcgcattccgttggacagcgcctatgatccagactcgggcagc
tttggtgtgcagacttacgagctcacgcccaatgagctgttcggcctggagatcaagact
cgcggcgacgggtcacgctttgctgaactcgtggtggagaagagcctggatcgtgagaca
cagtcgcactatagctttcgaatcactgcgctggacggcggcgacccaccacatctaggc
acagttggcctcagcatcaaggtgacagactccaatgataataacccggtgtttggcgag
tccacctacgcggtgagtgtccctgagaactcacctcccaacacacccgtcattcgcctc
aatgccagtgacccagacgagggcaccaacggccaagttgtctattccttctatggctat
gtcaacgaccgcacaagagaactcttccaaatcgacccacacagcggcttggtaacagtc
accggtgccctagactacgaagagggccacgtgtatgaactggacgttcaagccaaggac
ctgggacccaattctatcccagcacactgcaaggtcaccgtcagcgtgctggacaccaat
gacaatccaccggttatcaacttgttgtcggtcaatagcgagcttgtggaggtaagcgag
agcgcccccccaggctacgtaatcgccctggttcgagtatctgatcgcgattccggtctc
aatggacgtgtgcagtgccgtttgctgggcaatgtgccctttcggctacaggagtatgag
agcttctccactatcctggtggatggaaggctggaccgtgagcaacacgaccagtacaat
cttacaatccaagcccgagacggcggtgtccccatgctgcaaagtgccaaatcctttact
gtgcgcatcactgatgagaacgacaaccacccccacttctctaaaccctattatcaggtc
attgtgcaggagaacaacacacccggcgcttatctgctctctgtgtcagcccgagaccca
gacctggggctcaatggtagtgtctcctatcagatcgtgccttctcaggtacgggacatg
cctgtattcacttatgtctccatcaaccccaactctggagatatctacgcgctgcggtct
ttcaaccatgaacagaccaaggcattcgaatttaaggtgctggcaaaggatggtggcctg
ccctcgttacagagcaacgccacagtgcgggtcatcatcctggatgtgaatgacaatacc
ccggttatcacggccccgcccctaatcaacggcactgcggaggtctacattccccgaaac
tccggcataggctacttggtgaccatagttaaggcagatgactatgatgagggagaaaat
ggccgagtcacctacgacatgaccgagggcgaccgcggctactttgaaatagaccaggtc
aacggtgaagtcagaaccacccgtaccttcagcgaaagctccaaggcttcctatgagctt
attgtggtggcacatgaccacggcaagacatctctttctgcctctgcgctcgtcctaatc
tacctgtccccagctcttgatgctcaagagtcaatgggttcggtaaacctgtccctgatc
ttcattattgctctgggctccatcgcaggcatcctttttgtcaccatgatctttgttgca
atcaagtgcaagcgagacaacaaagagatacggacctacaattgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcagtttctcccattagcgagcagcaagacaaaaaggcagaggagaaagtgagccttagg
ggaaagagaattgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagcaagaatgacatccgtctggtacccagggatgtggaggagacagacaagatgaat
gttgtcagttgctcctccctgacctcctctctcaactattttgactaccaccaacaaacg
ctgcccctaggctgccgccgctctgagagcactttcctgaacgtggagaaccagaatact
cgaaatactagtgccaaccacatctaccatcactctttcaatagccagggtccccagcag
ccagatctgatcatcaatggtgtgcccctgcctgagactgaaaactattcttttgactcc
aactatgtgaatagccgagctcatttaatcaaaagcagctctaccttcaaggacctagag
ggtaacagcctgaaggatagtggacatgaggagagtgaccagactgacagtgagcatgat
gtccagaggagcctgtactgtgatactgctgtcaatgatgtgctgaataccagtgtgacc
tccatgggatctcagatgccagaccatg
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