Dipodomys spectabilis (banner-tailed kangaroo rat): 122110664
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Entry
122110664 CDS
T07891
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dsp01001
]
122110664 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122110664 (Trim28)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122110664 (Trim28)
Protein kinases [BR:
dsp01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122110664 (Trim28)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122110664 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
DUF7615
YaaC
Motif
Other DBs
NCBI-GeneID:
122110664
NCBI-ProteinID:
XP_042539190
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MAASAAAASSAAASAAAGSPGPGETSAGGEKRAAASSAAGSAAASASAASPAAGGGEALE
LLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSAGDGGAAGDGAVVDCPVC
KQQCFLKDIVENYFMRDSGGKAASDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEA
HQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDH
QYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL
QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNSTA
LLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGP
PPMAPPRAPGPLSKQGSGSSQPTEVQEGYGFGSDDPYSSAEPHVSGMKRSSRTAEGEVSG
LMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAGQSGAVPPGAP
GASPLPAMAIVKEEETEAAIGAPPTATEGPETKPVLMALTEGPGPEGPRLASPSGSTSSG
LEVVAPEGPSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGE
EWSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAKLSPANQRKCERVLLALFCHEPCRPLHQ
LVTDSTFSLEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADV
QSIIGLQRFFETRMNDAFGDTKFSAVLVEPPPLSLPSANLSSQELSGGPGEGP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcctcggcggcggcctcggccgctgcgggcagcccg
ggcccgggcgagacctcggcgggcggcgaaaagcgcgccgccgcctcttcagccgcgggc
tccgccgctgcctcggcctcggcggcgtcgcccgcggcgggcggcggcgaggcgctggag
ctgctggagcactgcggcgtgtgccgggagcgtttgcggcccgagcgggagccgcggctg
ttgccctgtctacactcggcctgcagcgcttgcctggggcccgcggcaccggccgcggcc
aacagcgcgggggacggcggcgcggcgggcgacggcgccgtggtggactgtcccgtgtgc
aagcagcaatgcttcttgaaagacatcgtcgagaactactttatgcgcgacagcgggggc
aaggccgcctccgacgcccaggatgccaaccagtgctgcactagctgtgaggataacgct
cccgctaccagctactgcgtggagtgctccgagccgctgtgcgagacgtgtgtggaggcg
caccagcgggtgaagtacaccaaggaccacaccgtgcgctccaccgggccagccaagtct
cgggatggtgaacgtactgtctattgcaatgtgcacaagcatgaaccccttgtgctgttc
tgtgagagctgtgataccctcacctgtcgggactgccagctcaatgcccataaggaccac
cagtatcagttcctggaggatgcagtgaggaaccagcgtaagctgctagcttcactggtg
aagcgccttggggacaaacatgctacactgcagaagagtaccaaggaggttcgcagctcg
attcgccaggtgtctgatgtgcagaagcgtgtgcaggttgatgtcaagatggccatcctg
cagatcatgaaggagttgaacaagcgaggtcgtgtgctggtcaacgatgcccagaaggtg
actgaggggcagcaggaacgcctggagcggcagcactggaccatgaccaagatccagaag
catcaggagcacatcctgcggtttgcctcttgggctctggaaagtgacaacagcactgcc
ctactgctttccaagaagctgatctatttccagctgcatcgagcccttaaaatgattgtg
gatcctgtggagccacacggtgagatgaagtttcagtgggacctcaatgcctggaccaag
agtgctgaagcctttggcaagattgtggctgagcgtcctggtaccaactccacaggtcct
ccacccatggctccaccacgagcccccggacccctgagtaagcaaggctctggcagcagc
cagcctacggaggtacaggaaggctatggttttgggtcagatgatccctactcaagtgca
gagcctcatgtatcaggcatgaagcggtcgtcccgcacagctgagggtgaggtgagtggc
ctcatgcgcaaggtgccccgggtgagccttgaacgcctagacctggaccttacagctgat
agccagccaccagtcttcaaagtctttcccggcagcaccactgaggactacaacctcatt
gtcattgagagaggtgctgcagcagctggtcagtcaggggctgtgcccccaggggctcct
ggtgcctctcccctgcctgccatggccattgttaaggaggaggagacagaggctgccatt
ggagccccacccactgccactgagggtcctgagaccaagcctgtgctcatggctctgacg
gagggccctggccccgagggcccccgcttggcctccccgagtggcagtactagctctggc
ctagaggtggtggctcctgagggcccttcagcccccgctggtggcccaggtgccctcgat
gacagcgccaccatctgccgtgtctgccagaagccaggagacttggtcatgtgtaaccag
tgcgagttttgtttccaccttgactgccatctccctgccctacaggatgtgccaggggag
gagtggagctgctcactctgccatgtgcttcctgacctgaaggaggaggatggcagcctt
agcttggatggtggggacagcactggtgtagtggccaagctctcaccagccaaccagcgg
aaatgtgaacgtgtcctgctggcgctgttctgccatgagccctgccgccctctacaccag
ctggttactgattctaccttctccctggagcagcctggtggtaccctggacctaaccctg
atccgtgcccgcctccaagagaagctgtcacccccttacagttctccacaggagtttgcc
caggatgtgggccgcatgttcaagcagttcaacaagttgactgaggacaaggcggatgtg
cagtccatcatcggcctacagcgttttttcgagacacgcatgaatgatgccttcggtgac
accaagttctctgctgtgttggtggagcccccaccgctgagtctgcccagtgctaaccta
agttcccaggagctgtctggtggccctggtgagggcccctga
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