Dipodomys spectabilis (banner-tailed kangaroo rat): 122110851
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Entry
122110851 CDS
T07891
Symbol
Mbd5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122110851 (Mbd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122110851 (Mbd5)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122110851 (Mbd5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
122110851 (Mbd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
122110851
NCBI-ProteinID:
XP_042539494
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MNGGKECDGGDKEGGLPAIQVPVGWQRRVDQNGVLYVSPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTGPGGGTNATPVVPSRAATPRSVRNKSHEGITNSVMPECKNPFKLMIGSSNAMGR
LYVQDLPGSQQQELHPVYPRQRLGSSEHGQKSPFRGSHGGLPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPGFHGAPNSSPIHLNRTPLSPPSVMLHGSPVQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSTNMEIPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPVNQNPVIINPTSFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTIKPGHMNHG
SHVQRVQHSVSTSLSPSPVTSPVHMMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPVGPQ
ATCSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGMSNVLNTPCSAA
FSTASAGSGSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNSS
SSSNSGAVAGSGNTEGHSTLNTMFPPTANMLLPTGEGQSGRAALRDKLMSQQKDSLRKRK
QPPTTVLSLLRQSQMENSAVPKPGPDVLRKQGQGSFPISSMSQLLQSMSCQSSHLSSNST
PGCGGSNTALPCSANQLHFTDPSMNSSVLQNSLTQNIPLRGEAVHCHNANTNFAHSNNPV
PNHHLAGLINQIQASGNCGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQT
SSEAGSSGPSSSIAIAGTNHPAITKTTSVLQDGVIVTTATGNPLPSQLPLGSDFPFVGQE
HALHFPSNSTSNNHLPHPLNPSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEINL
HPLGFLNPNVNAALAFLSGDVDGQVLQPVHFQLLAALLQNQAQAAAMLPLPSFNLTISDL
LQQQNTPLPSLTQMTAPPDHLPSNQSDNSRAETLLTNPLGNPLPSFTSSDTTFNPLFLPA
VTGASGLMALNPQLLGGVLNSASANTANHPEVSIATSSQATTTTTTTSSAVAALTVSTLG
GTAVVSMAETLLNISNNAGNPPGPAKLNSNSVVPQLLNPLLGTSLLGDMSSINNTLNNHQ
LSHLQSLLNNNPMFPPSQQQQQLLQGYQSLQAFQGQSAIPCPANNNPMACLFQNFQVRMQ
EDTALLNKRISTQPGLTSIPENPHTTLPPFQDSPCELQPRIDPSLSQQVKDGQNDASVDA
IYKAVVDAASKGMQVVITTAVNSTTQISPIPALSAMSAFTASIGDPLNLSSAVSAVIHGR
NVGGIDHDGRLRNARGARLPRNVDHGKNSNEGDGFEYFKSASCHTSKKQWDGEQSPRGER
SRWKYEEFLDHPGHIHSSSCHERPNNVSTLPFLPGEQHPILLPPRNCQGEKILEENFRYN
NYKRTMMSFKERLENTVERCAHINGNRPRQSRGFGELLSTAKQDLVLEEQSPGSSNSLES
SLVKDYIHYNGDFNAKSMNGCVPSPSDAKSISSEDDLRNPDSPSSNELIHYRPRTFNVGD
LVWGQFKGLTSWPGKLVREDDVHSSCQQSPEEGKVEPEKLKTLTEGLEAYSRARKRNRKS
GKLNNHLEAAIHEAMSELDKMSGTVHQIPQGDRQMRPPKPKRRKISR
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggcaaagagtgtgacggaggggacaaggaaggaggtcttccagctatacaa
gttcctgtgggttggcagcgtcgtgtggatcaaaatggagtgctttatgtcagtcccagt
ggatctttgttatcttgcttggagcaggttaaaacatacctgcttacggatggaacatgc
aagtgtggcctggagtgtcctcttattcttcccaaggtgtttaattttgatcctggagct
gctgtgaaacagagaactgcagaagatgttaaggcagacgaagatgtcacaaaattatgc
atacataagagaaagatcattgcagtggccacacttcataaaagcatggaagccccacat
ccttctctggtgctcaccggtcccggaggaggaacaaatgcaactccagtagtaccttca
agggcagcaactccaagatcagtaagaaacaagtctcatgaaggaattacaaattctgta
atgcctgaatgtaagaatcctttcaagttaatgattggatcatcaaatgccatgggaagg
ctttatgtacaagacctgcctggaagccagcaacaagaactccaccctgtctacccccgg
cagagattgggcagcagtgaacatggacagaaatctccattccgtggcagccatggaggc
ctgcccagccccgcatcatcaggttcccaaatctatggagatggctcaatctctccaagg
actgacccacttggaagccctgatgttttcacaagaaataatcctggttttcatggagct
cccaattccagtcctattcacttgaataggactcctctttctccaccttcagtaatgcta
catggttctcctgtacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgactacaaagagtccagtaatgaaaaaaccaatgtgtaatttttcaactaat
atggaaataccacgcgcaatgttccaccacaaaccaccccaaggcccacctccccctcct
ccaccttcttgtgctcttcagaaaaagccattaacatctgagaaagatccacttggcatt
cttgaccctattcctagtaaaccagtgaatcagaaccctgttatcattaatccaaccagt
ttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgctgtt
gttcctttgccaagtaatctccctttgccaaccataaaacctggtcacatgaatcatggg
agtcatgtacaaagagttcagcattcagtttcaacctccctgtccccttctccagtgaca
tccccagtgcacatgatggggactggaattggaaggattgaggcatcgccccaaagatca
cgctcatcttccacatcatccgatcacggaaatttcatgatgccacctgtaggaccgcag
gccacttgcagtggtataaaggttccaccccggtcaccaaggtcaacaatagggtcccca
aggccatcaatgccatcaagcccttctaccaagtccgacggacatcatcaatacaaggat
atccctaacccattaattgctggaatgagtaatgtactaaatactccatgcagtgcagct
ttctctactgcatctgcaggaagtggttctgtaaagagtcagcctggtttgctgggaatg
cctttaaatcagatcctgaaccagcacaatgctgcctcctttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaacaaacttgctggtaacaacagtagc
agcagtagcaattctggagctgttgccggtagtggcaacacagaaggacatagcacttta
aacaccatgttccctcctactgccaacatgcttctcccaacaggtgaagggcaaagtggt
cgagcagcactaagagataagctgatgtctcagcaaaaagactcattgcggaaaagaaaa
cagccacctaccacagtgttgagtttgctcagacagtctcaaatggaaaactccgcagtt
cctaaacccggacctgatgtgctaaggaagcagggtcagggttcatttcccatcagttca
atgtctcagttacttcagtctatgagttgtcaaagctctcacttgagtagcaatagtacc
ccaggttgtgggggctcaaatactgctttgccttgctctgctaaccagctgcattttaca
gatcccagtatgaactccagtgttcttcagaattcactgacacagaacatacctttaaga
ggggaagccgtgcactgccataatgcaaacactaactttgctcacagtaacaatccagtc
cccaaccaccatcttgcaggtttaataaatcagattcaggctagcgggaactgtgggatg
ctcagtcagtcgggcatggctttaggaaattcattacatcccaatccacctcagtcaaga
atttcaacgtcgtccactccagtgataccaaacagcattgttagcagctataatcaaaca
agttctgaagcaggaagttccggcccatcgtcctccatagccatagcaggcaccaaccat
cctgccattacaaagacaacatctgttctccaagatggagtcatagtcaccactgcaact
ggaaacccactgccgagtcagctgcctcttgggagtgattttccttttgttggccaggag
cacgcacttcattttccatccaacagcacttcaaacaaccatcttccacaccccttgaac
cccagcctcctcagttctctacctatctctttgccagtgaatcaacagcatctcctaaac
cagaatctattaaatatcctccagccttcagcaggagaaggcaagtctgagatcaacctc
caccctttaggttttctcaacccgaatgtaaacgctgctttagcttttctctccggtgac
gtggatgggcaggtattgcagcctgttcactttcaacttttagcagccctgcttcagaac
caagcccaagcagctgccatgcttcccctgccatctttcaatctgaccatctcagatctt
ttgcaacaacaaaatacccctttaccctcattaacacagatgacagccccaccagaccat
ttgccaagcaatcagtcagacaacagcagagctgagacccttttaaccaaccccctgggg
aatcctttaccaagctttacaagcagtgacactacttttaatcccctgttcctcccagct
gtcactggggcctcaggattaatggccttgaatccccagctgttgggaggtgtcctgaac
tcggcatcggccaacaccgctaatcatccagaggtttccatagcaacctcctcccaggca
accactaccacaaccactacatcatcagcagtggcagcactgactgtctcaacacttggt
gggacagcagtggtgtcaatggcagaaacattgctgaatatatctaataatgctgggaat
ccacctgggccagctaaactcaacagtaactctgtggtgccacagctacttaaccctcta
ctggggacaagtctgcttggtgatatgtcatcgataaacaatactttgaataaccatcag
ctgagtcatctacagtcactgttaaacaacaatccgatgtttcctccaagtcagcaacag
cagcaacttctccagggctaccagagtcttcaagccttccaaggacagtctgcaatcccc
tgcccggctaacaataatcctatggcttgtctgtttcagaactttcaggtgagaatgcaa
gaagacacagctctcctaaacaaaagaataagcactcagccagggctcacatcaattcct
gagaatccacatacaacactcccacctttccaagatagtccctgtgagttgcaaccaagg
attgacccatctcttagtcagcaggtgaaggatggccaaaatgatgcctctgtggatgcc
atttacaaagccgttgtcgacgcagccagcaaagggatgcaggttgtcatcaccaccgcg
gtcaacagtacaactcagatcagccctattccagccctgagtgccatgagtgccttcact
gcctcaattggtgatccattaaatctctccagtgctgtcagtgcggtcattcatggacgg
aacgtgggaggcattgatcacgatggcaggctgaggaatgcaagaggggctcggctaccc
aggaatgtagaccatggtaaaaactccaatgaaggagacgggtttgagtatttcaagtca
gcaagttgccacacatccaaaaaacagtgggatggggagcaaagccccagaggagagaga
agcagatggaagtatgaggaattcttagatcatccaggccatatccacagcagttcttgt
cacgaaaggcccaacaatgtctctacactgccatttctgcctggggaacagcatccaata
ctgttaccaccacgaaactgtcaaggagaaaaaattctggaggaaaatttcaggtataat
aactacaaaagaactatgatgagttttaaggagagactagagaacactgtggaacgatgt
gcacacattaatggaaacagacctcgacagagtcggggatttggggagctgctaagcact
gcaaagcaagacctggtcctagaggagcaatctccaggttcctcaaatagtttggagagt
tctctggtcaaagactacatccattacaatggagactttaatgccaaaagcatgaatggg
tgtgtgcctagcccgtcggatgctaaaagcattagtagtgaagatgacctaaggaatcca
gactccccctcttcaaatgagttgatacactatagaccaaggacgttcaacgttggcgac
ttggtctggggccaattcaaaggactgacttcctggcctggaaaattagtaagagaagac
gacgttcacagttcatgtcaacaaagccccgaggaagggaaggtggagcccgagaagttg
aagacactaacagaaggtttggaagcctacagccgagcccggaaaaggaacagaaaaagt
ggaaagctaaataaccatttagaagctgctattcatgaggccatgagtgaactggacaag
atgtctgggactgttcaccaaatcccacagggagacagacaaatgagaccccccaagccc
aaaaggaggaagatctccagataa
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integrated database retrieval system
