Dipodomys spectabilis (banner-tailed kangaroo rat): 122111074
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Entry
122111074 CDS
T07891
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122111074 (Trim27)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122111074 (Trim27)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122111074 (Trim27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-Tbcl_FmdE
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
122111074
NCBI-ProteinID:
XP_042539716
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVDGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgcctg
cagtacttcgcggagcccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcgcgctgctggggcgccgccgagaccaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcggcacatgcggcccaaccggcacctggccaacgtcacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggcccggcggcgagatgggcgtgtgcgagaagcaccgc
gaacccctgaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcccgcgagcaccgcggccacagcgtgctgccgctcgaggaggcggtggacggcttcaag
gaacaaatccagaatcagctggaccatctaaagagagtgaaagacttaaagaagagacgg
cgggctcagggtgaacaggcacgagctgaactcttgagcttgactcagatggagagggag
aagattgtttgggagtttgagcagctgtatcactccttgaaggagcatgaatatcgcctc
ctggcccgcctcgaggagctagacttggccatttacaacagcatcaacggtgccatcacc
cagttttcctgcaacatctctcacctcagcagcctgattgctcagctggaggagaagcag
cagcagcccaccagggagcttctgcaggacatcggagacacattgagcagggctgaaaga
atcaggatccctgagccctggatcacacctccagatctgcaagagaaaatccacattttt
gcccaaaaatgtctgttcttgaccgagagtctgaagcagtttacagaaaaaatgcagtca
gatatggagaaaatccaagaattgagagaagctcaattatactcagtggatgtgactctg
gacccagacacggcctaccccagcctgatcctctctgataatctgcgacaagtacgctac
agttacctccaacaggacctgcccgacaaccctgagcggttcaatctgtttccctgtgtc
ttgggatctccgtgtttcatcgctgggagacattattgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactcggtgtgcagaaaaggtggagtaacttcg
gccccccagaacggattctgggcagtgtcgttgtggtatgggaaagaatattgggcactt
acctccccaatgactgccctccccctgcggacccctctccagcgggtggggattttcctg
gactatgatgctggtgaggtctccttctacaacgtgacagagaggtgtcatacctttact
ttctcacatgctaccttctgtgggcctgtccggccctacttcagcctgagttactcggga
gggaagagtgcagctcctctgatcatctgccccatgagtgggattgatgggttttctggc
catgtagggaatcatggtcattccatggagacttccccttga
DBGET
integrated database retrieval system
