Dipodomys spectabilis (banner-tailed kangaroo rat): 122111215
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Entry
122111215 CDS
T07891
Symbol
Chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122111215 (Chd1l)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122111215 (Chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
AAA_22
ERCC3_RAD25_C
SLFN-g3_helicase
SVIP
Motif
Other DBs
NCBI-GeneID:
122111215
NCBI-ProteinID:
XP_042539879
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MGLGKTCQTIALFLYLAGRLNDEGPFLILCPLSVLNNWKEELERLAPDLSCIIYAGAKEE
RAHLQHGLKEESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSQLHKTLTE
FSVVFRILLTGTPIQNSLSELYSLLSFVEPELFSREQVEDFVQRYQDIEKESTSASELHR
LLQPFLLRRVKAEVAADLPRKTEVVIYHGLSALQKKYYKAILMKDLDAFENEMAKKKLQN
VLSQLRKCVDHPYLFDGVEPEPFEIGEHLVEVSGKLHLLDKLLAFLYSRGHRVLLFSQMT
QMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFTFLLSTRAGGVGMNLTAA
DTVIFVDSDFNPHNDLQAAARAHRIGQDKSVKVIRLIGRDTVEEIVYRKAASKLQLTNKV
TEGGHLTLGTQKASADADLQLSEILKFGLDKLLSSEGSTMSDMDLESILGETKDGQWVPD
GLSAEGGEAREQEEGKNHMYLFEGKDYSKEPSKEDKKSFEQLVTLQKTLLLEKMSQEGRS
LRKKGTVLIPGLVEGTSKRKRVLSPEELEERRKKREEAAAKRKRQVEERRKAKKEAEHKK
KMTWWESSGYQSFCLPSEDSEPEELEDEVEEDSSDLDYGDPDSTSIKYISGDVTHPQAGA
EDALIVHCVDDSGRWGRGGLFTALEARSAEPRKRYELAGKMQDLSMGGVLLFPIDDKVSR
DKGHDLLALVVAQHRDRANTLSGIRMAALEEGLKKIYVAAKKKKASVHLPRIGHATKGFN
WYGTERLIRKYLAARGIPTYIYYFPRSRAAGIHSPSFTSSSTQPLP
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgggtaagacctgccagacgattgctctcttcctgtacctggcaggaaggtta
aatgatgaaggaccatttctcattctttgtcccttgtctgtcttgaacaactggaaggaa
gagttggaaagattggctcccgatctttcctgcatcatctacgcaggtgctaaggaggag
agagcccaccttcagcatggcctgaaagaagagtcgcgttttcatgtgctgctgaccacc
tacgagatttgcttgaaagatgcctcatttctgaaatcctttccttggagtgttcttgtt
gtggatgaagctcacagactgaagaaccaaaactcccagctgcataagacactcacagag
ttctcagtggtcttcaggatcctattgaccggaacacccatccagaacagcctctcggaa
ctctactccctcctcagttttgtggagcctgaactcttttccagagagcaggtggaagat
tttgttcagcgttaccaggatattgagaaagagtccacatcagcaagtgaactacacaga
ctcctgcagccatttctgctgagacgagtgaaagctgaggtcgctgctgaccttcccagg
aaaacagaagtagtgatttaccatggcctgtcagccctgcagaaaaaatactacaaggcc
attttgatgaaagacttggatgcatttgaaaatgagatggcaaagaaaaaactccagaac
gtcttgtcccagcttcgaaagtgtgtggatcatccgtacttgtttgatggtgtggaacca
gagccttttgaaattggagaacacctggttgaagttagtggaaaacttcacctactggac
aagctgctggcattcctgtattccaggggccatcgggttctgcttttctctcagatgacc
cagatgttggatattctccaagactatatggattacagaggctatagctatgagcgtgtg
gacggctcagtgaggggagaagagaggcacctggccattaagaacttcggacaacagccc
attttcactttcctcctgagcacgagggcaggcggagttggcatgaacttaacagcagca
gataccgtgatttttgttgacagcgactttaaccctcacaacgacttgcaggcagctgcc
agggctcaccggattggccaggacaagtctgttaaagttattcgactgattggccgagac
actgtggaagaaattgtctacaggaaggcagcctccaaactgcagctcaccaacaaggtc
acagaaggaggccatttgactctaggaacccagaaagcttccgcagatgcagacctccag
ttaagtgagattctcaagttcggcttggataaacttctgtcctctgaggggagcaccatg
agtgacatggacctggagtccatcctaggagaaaccaaggatggccagtgggtcccagat
ggcctgtctgctgaaggaggagaggccagagagcaagaggaaggaaaaaaccatatgtac
ttatttgaaggtaaagattattctaaagagcccagtaaagaagacaaaaagtcatttgaa
caactggtaactcttcagaaaactcttctgttggagaaaatgagtcaagagggacggtca
ctccgaaagaaaggcactgttctgatccctggtcttgtggaggggacctccaagaggaag
cgagttctgagcccagaagaactggaggagagacggaagaaaagagaagaagcagcagcc
aagagaaagagacaagtagaggagaggaggaaggcaaagaaagaagctgagcataagaaa
aagatgacctggtgggagtccagtggttaccagtccttctgcctgccctcggaggacagt
gagccagaggagcttgaggatgaggtggaagaggattcttctgacctggattatggagac
ccagactcgacctccatcaagtacatcagtggagatgtcacccaccctcaggcgggggca
gaagatgccctcatcgtgcactgcgtggatgactctggccgctggggccgaggtggttta
ttcacagctctggaggcacggtctgctgagccaagaaaaagatatgagttggctgggaaa
atgcaagatttgagtatggggggtgtccttttatttcccattgatgataaagtatcaaga
gacaaggggcacgatttgttggccttggttgtagctcagcaccgagatcgcgccaacacc
ctctctggcattcggatggcagccctagaagagggcctgaagaagatctatgtagcagca
aagaaaaagaaagcaagtgttcatcttccacgcatcggacatgccaccaagggtttcaat
tggtacgggaccgagcgccttattcggaagtatttggctgccagaggcattccaacgtac
atatactactttcctagaagtagggctgctggcatccattccccgtccttcacttcctcc
tccacccagccactgccctaa
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