Dipodomys spectabilis (banner-tailed kangaroo rat): 122111237
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Entry
122111237 CDS
T07891
Symbol
Abca4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122111237 (Abca4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122111237 (Abca4)
Transporters [BR:
dsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122111237 (Abca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
ABC2_membrane_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
122111237
NCBI-ProteinID:
XP_042539897
LinkDB
All DBs
Position
Unknown
AA seq
2268 aa
AA seq
DB search
MGFARQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLILIWLRNANPLYSQHQCHFPNKA
MPSAGMLPWLQGIFCNVNNPCFRSPTPGESPGIVSNYNNSILARVYRDFREVLVDAPESQ
HLGQVWVELRTFARLMDTLRTHPERFAGRGIQTRDILKDEETLTLFLMRNIGLSNSVANL
LVNSQVRVEQFAHGVPDLALKDIACSEALLERFIIFSQYRGAQTVRDTLCPLSPGTLQWM
EDTLYANVDFFKLFRVLPTILDRSSQGINLRSWGRILSDISPRIQEFIHRPSVQDLLWVM
RPLLQKSGPETGTQLMSLLPDLVCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPVY
SYDKRTTSFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAVRRILKNANSTFEE
LERLRKLIKAWGEVGPQIWYFFDKSTQITMIRDTLGHPTVKDFVNKQLTGEGVTAEAILN
FLYKGPGDNPSEDTTDFDWRDIFNITDRSLRLINQYLECLVLDKFESYDDEMQLTQRALS
LLEQNRFWAGVVFLDMYPWTSHLPRHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
LRYIWGGFAYLQDMVEQGITRSQARAAAPIGVYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMLMSIFLLTIFIM
HGRILHYSDPLILFLFLLAFSTATIMQCFLLSTFFSKASLAASCSGVIYFTLYLPHILCF
AWQDRMTAELKQAVSLLSPVAFGFGTEYLVRFEEQGLGLQWDNIGNSPMEGDEFSFLLSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPL
TEEMEDPEHPGMNDSFFERELPGLVPGVCVKNLTKVFESCSRPAVDRLNITFYESQITAF
LGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDEIRQSLGMCPQHNILFHHLTVA
EHILFYAQLKGKSWEEAQLETEGMLEDTGLHHKRNEGAQDLSGGMQRKLSVAIAFVGDSK
VVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCS
GTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGTCSCASKGFSRCPARVDEITEEQVLD
GDVNELKDLVRHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSF
GISDTPLEEIFLKVTEDSDAGSLFAGGTQQKKEPTTLRHPYLGSNKKGGQPPHTCSPGQA
APSEGQTSPPEPEDSSPPLNTGTRLVFQHVQALLVKRFHHTLRSYKDFLAQIVLPATFVF
LALMLSIIVPPFGEFPALTLHPWMYGKQYTFFSMDEPGSERLAELADVLLNKPGFGNRCL
KEEWLPEYPCGNSTPWKTLSVSPNLTHLFQKQKWTTANPSPSCRCSTREKLTMLPECPEG
AGGLPPPQRTQPSTEILQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGK
LPAIPITGEALVSFLRDLGQIMNVSGGSITREASKEIPEFLKYLETQDNIKVWFNNKGWH
ALVSFLNVAHNAILRASLPKGRNPEDHGITVISQPLNLTKEQLSEITVLTTSVDAVVAIC
VIFAMSFVPASFVLYLIQERVTKAKHLQFVSGVSPTTYWLTNFLWDIMNYAVSAGLVVGI
FIGFQKKAYTSPQNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFVGIN
SSAITFILELFENNRTLLRFNTMLRKLLIIFPHFCLGRGLIDLALSQAVTEVYARFGEEH
ISNPFQWNLIGKNLVAMAVEGVAYLLLTLLIQHHFFLTRWIAKPTREPITDEDDDVAEER
QRIISGGNTSDILRLNELTKVYSGSTSPAVDRLCVGIHPGECFGLLGVNGAGKTTTFKML
TGDTTVTSGDATVAGKSILTDISDVHQRMGYCPQFDAIDDLLTGREHLYLYARLRGVPAE
EIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQA
RRLLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGY
IVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQYQVSSSSLARIFQLLISH
KDSLLIEEYSVTQTTLDQVFVNFAKQQTETYDLPLHPRAAGASQQAKV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgctagacagatacagcttttgctctggaaaaactggaccctgcggaaaagg
caaaagattcgctttgtggtggaactagtatggcctttatccttgtttctcatcttgatc
tggctaaggaatgctaacccgctctacagccaacaccaatgccattttcccaacaaggcg
atgccctcagcaggaatgttgccatggctccaggggattttctgcaatgtgaacaatcct
tgttttcgaagccccaccccgggggaatctcctggcattgtgtcaaactataacaactcc
attttggcaagggtgtatcgagattttcgagaagtcctcgtggatgcaccagagagccag
catcttggccaggtttgggtggagcttcgcacctttgccaggctcatggacaccctgagg
actcaccctgagagatttgcaggaagaggaatacaaactcgagatattttaaaagatgaa
gagacgctgacattgtttctcatgaggaacattggcttgtccaactcggttgccaacctt
ctggtcaattcccaagtccgcgtggaacagtttgctcatggagtcccagacctggcactg
aaggacatcgcctgcagcgaggccctcttggagcgctttatcatcttcagccagtatcgc
ggggcacagactgtgcgtgataccctgtgtcccctttccccgggcaccctacagtggatg
gaagacactctgtacgccaacgtggacttcttcaagctcttccgtgtgcttcccaccatc
ctggacagaagttctcaaggtatcaatctgagatcctgggggagaatattatctgatatc
tcacctagaattcaagagtttatccatcggccaagtgttcaagacttgctgtgggtgatg
agacctctcctgcagaaaagcggtcctgagactggcacccagttgatgagcctcctgcct
gacctcgtgtgtgggtaccccgagggaggaggctcacgcgtgttctccttcaactggtat
gaagacaataactacaaggccttcttggggatcgactccacaaggaaagaccctgtctat
tcctatgacaaaagaacaacatccttttgtaacgcgttgatccagagcctggagtcaaac
cctttaaccaaaatagcctggagggcagcaaagcctttgcttatgggaaaaatccttttc
actcctgactcccctgcagtgcgaagaatactgaagaatgcaaattcaacttttgaagaa
ttggaacgcctcaggaagctcatcaaagcctggggagaagtagggcctcagatctggtac
ttctttgataagagcacccagataaccatgatcagagacacgctggggcacccaacagta
aaggactttgtgaataaacagcttacaggagaaggtgtcaccgcggaagccattctaaac
ttcctctataagggtccgggagacaacccgtctgaggacacaaccgactttgactggaga
gatatatttaacatcactgaccgctccctacgcctgattaatcagtacttggagtgcctg
gtcctggataagtttgaaagctacgatgatgaaatgcagctcacccagcgagccttgtct
ctgctagaacaaaaccgattctgggctggtgtggtgttcctggacatgtatccctggacc
agccacctgccacgccatgtgaagtataagatccggatggacatagatgtggtagagaaa
acaaataagatcaaagacaggtactgggactctggtccccgggcagaccctgtggaagat
ctccggtatatttggggaggctttgcctatctgcaggacatggttgagcaggggatcacc
aggagtcaggcccgggcagcagctcccattggggtctatcttcagcagatgccttatccc
tgctttgtggatgactcttttatgatcatcctgaaccgttgttttcccatcttcatggtg
ctggcgtggatctactccgtctccatgacggtcaagagcattgtcttggaaaaagagttg
aggctgaaggagacgctgaaaaatcagggtgtctcgaatgcagtgatttggtgtacctgg
tttctggacagcttctccatcatgttgatgagcatcttcctcctaaccatcttcatcatg
catggaagaatcttacattacagcgacccgctcatcctcttcctgttcctgctggccttc
tccactgccaccatcatgcagtgcttcctgctgagcaccttcttctccaaggccagccta
gcagcctcctgcagcggggtcatctacttcaccctctacctaccacacatcctgtgcttc
gcctggcaggaccggatgacggctgagctcaagcaggctgtgagcttgctgtctcccgtg
gcatttgggtttggcaccgagtatctggtccgctttgaagaacaaggcctcgggctgcag
tgggacaacatcgggaacagccccatggaaggagatgagttcagtttcctgctgtctatg
aagatgatgcttcttgatgccgccttgtatggcttactggcctggtacctggaccaggtg
tttccaggagactatggaactccacttccttggtacttccttctacaagagtcttattgg
cttggtggtgaagggtgttcaacgagagaagaaagggccctggaaaagactgaaccccta
acagaggaaatggaggacccagagcatcctggaatgaatgactccttctttgaacgggag
cttccggggctggttcctggagtgtgtgtgaagaatctgacgaaggtttttgagtcctgt
agccggccagctgtggaccggctcaacatcaccttctatgagagccagatcaccgcgttc
cttggacacaacggcgcgggaaaaaccaccactttgtctatcctgacaggtctgttgcca
ccaacatcaggaactgtgctcattgggggaaaggacattgaaaccagcctggatgaaatc
cgccagagcctgggcatgtgcccacagcacaacatcttgttccaccacctcaccgtagcc
gagcacatcctgttttatgcccagctgaaggggaagtcctgggaggaggcccagctggag
accgaaggcatgttggaggacacgggcctccaccacaagaggaatgaaggggcccaggat
ctctcaggtggcatgcagaggaagctgtccgtggccatcgcctttgtgggcgattctaag
gtggtgattctggatgagcccacctctggggtggatccctactccagacgctccatctgg
gacctgctcctgaagtatcgctcagggagaaccatcatcatgtccacgcaccacatggac
gaggcagacctcctaggggaccgcatcgccatcatttcccagggcaggctctactgctcg
ggcaccccgctcttcctgaagaactgcttcggcacaggcttctatttgaccttagttcgc
aagatgaaaaacatccagagtcaaagaggtggttgtgagggaacctgcagctgtgcgtcg
aagggcttctccaggtgtccagctcgagtggatgagatcactgaagaacaagtcttggac
ggggatgtaaatgagctgaaggacttggttcggcaccatgttccagaagccaagctggtg
gaatgcattggtcaagaacttatcttccttctgcctaataagaatttcaagcagagagcg
tatgccagccttttcagagagctagaggagacgctggctgacttggggctcagcagtttt
ggaatttctgacactcccctggaagagatttttctgaaggtcacggaggactctgatgcg
ggatctctatttgccggtggcactcagcagaaaaaggaacccaccactctccgacacccc
tatttgggttccaacaagaaaggggggcagcctccccacacctgctcccctgggcaggct
gccccctctgagggccagacttctcctccggagccagaggactccagtcccccactcaac
acgggcacccggctagtcttccagcacgtgcaggctctgctggtcaagcgattccaccac
acgctccgcagctacaaggacttcctggcccagatcgtgctccctgccacgtttgtgttt
ctggctctgatgttgtccatcatcgtgcctccttttggggaatttcctgctttgaccctt
cacccctggatgtatgggaagcagtacacattcttcagcatggatgagccgggcagcgag
cgccttgcagaactggcagacgttctcctaaacaagccaggctttggcaaccgctgcttg
aaggaagaatggctcccggagtacccgtgcggcaactccacaccctggaagactctctct
gtgtctccaaacctcacccacctgttccagaagcagaaatggacgacagccaacccctca
ccctcctgcagatgcagcaccagggagaagctcaccatgctgcccgagtgccccgaggga
gccggcgggctccctcccccccagagaacacagcccagcactgaaatcctacaagacctg
actaacaggaacatttctgactacttggtaaagacgtaccccgctctcataagaagcagc
ttaaagagcaaattctgggtcaatgaacagaggtatggaggaatatccattggaggaaaa
ctcccagccatccccattactggagaagcacttgttagttttttaagagaccttggccag
atcatgaatgtgagcgggggctctatcaccagagaggcctctaaagaaatacctgaattc
cttaaataccttgaaactcaagacaacattaaggtgtggtttaacaacaaaggttggcat
gctctagtaagctttctgaacgtggcccacaatgccatcctccgggccagcctgcccaag
ggcagaaacccagaggatcatgggatcacggtcatcagccagcccctgaacttgaccaag
gagcagctctcagagatcactgtgttgaccacttctgtggatgctgtggttgccatctgt
gtgattttcgccatgtccttcgtcccggccagctttgtcctctacttgatccaagagaga
gtgactaaagctaagcacctgcagtttgtcagtggagtgagccccaccacctactggctg
accaacttcctgtgggacattatgaattatgctgtgagcgcagggctggtggtgggcatc
ttcatcgggtttcagaagaaagcctacacgtctccccaaaaccttcctgccctcgttgcc
ctgctcatgctgtatggatgggctgtcatccccatgatgtacccagcatccttcctgttc
gatgtccccagcacagcttatgtggctttgtcttgtgctaatctgtttgtcggcatcaac
agcagtgccatcaccttcatcctggagttatttgagaataacaggacactgcttaggttc
aataccatgctgaggaagctgctcattatctttccccacttctgccttggccggggactt
attgacctggcgctgagccaggccgtgacagaggtctatgctcggtttggagaggagcac
atctccaatccgttccagtggaaccttattgggaagaacctagttgccatggcagtggaa
ggtgtggcatacctcctcctgaccctcctcatccagcaccacttcttccttacccgatgg
attgccaaacccaccagggagcccattactgatgaagatgatgatgtggctgaagagaga
caacgaattattagtgggggaaatacaagtgatattttaagattaaatgaactaaccaag
gtgtattcaggctccaccagcccagcagtagataggctgtgtgtcgggattcaccctgga
gaatgcttcggtctcctgggagtaaatggtgctggaaagaccaccacattcaagatgctc
actggggacaccacagtgacctctggtgatgccacggtggcaggcaaaagcatcttaacc
gatatttcagacgtccatcaaagaatgggttactgtcctcagtttgatgcaattgatgac
ctgctcacaggccgagaacatctctacctttatgccaggctccggggtgtacccgcagaa
gaaattgagaaggtggcgaactggagtattcagagcctggggctgtctctctatgcggac
cgcctagccggcacatacagtgggggcaataaacgcaagctctccaccgccattgcgctc
atcggctgcccaccactggtgctgctggacgagcctaccacagggatggacccccaggct
cgccgcctgctgtggaacaccatcgtgagcatcatcagagaaggaagggctgtggtcctc
acttcccatagcatggaagaatgtgaagcgctgtgtacacggctggccatcatggtgaag
ggcacctttcagtgtctgggcaccattcagcacctcaagtacaagtttggagatggctac
attgtcacaatgaaaatcaaatcccccaaggatgacttgcttcccgacctgaatccagtg
gagcagtttttccaaggcaactttccaggcagcgtgcagagggagaggcactacaacatg
ctacagtaccaggtctcctcgtcctccctggccaggatcttccagctgctcatctcccac
aaggacagtctgctcatcgaagagtactcagtcacacagaccacactggaccaggtattt
gtgaacttcgctaaacagcagactgaaacatacgacctccccctgcacccccgagctgca
ggagcgagccaacaagccaaggtttga
DBGET
integrated database retrieval system
