Dipodomys spectabilis (banner-tailed kangaroo rat): 122111296
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Entry
122111296 CDS
T07891
Symbol
Vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122111296 (Vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsp01007
]
122111296 (Vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsp03016
]
122111296 (Vars2)
Enzymes [BR:
dsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122111296 (Vars2)
Amino acid related enzymes [BR:
dsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122111296 (Vars2)
Transfer RNA biogenesis [BR:
dsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122111296 (Vars2)
Prokaryotic type
122111296 (Vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
122111296
NCBI-ProteinID:
XP_042539960
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MPHLPLASFRPPFWGLRPSRGLPKPRPLSTQSEPHSSSVSRRNREAKQKRLREKQEALEA
AITRKSKSPAETSKAWSPKEIVLYEIPTEPGEKKDVSVPLPPAYSPRYVEASWYPWWVRE
GFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWV
PGSDHAGIATQAVVEKQLWKEQGVRRHELGREDFLKEVWQWKEEKGGEICEQLRALGASL
DWDRECFTMDAGSSVAVTEAFVRLYNAGLLYRNCQLVNWSCALRSAISDIEVENRPLPGR
TELRLPGCPTPVSFGFLVSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLTGQLLPLITDPAVQPQVGTGAVKITPAHSPADAEMGARHGLSPLTVIAEDG
TMTSLCGDWLQGLHRFVAREKIMCALRERGQFRGLQDHPMVLPICSRSGDVVEYLLKSQW
FVRCQEMGDRAAQAVESGALELCPSFHQKSWQHWFAHIGDWCVSRQLWWGHRIPAYLVTE
GHEKQDDKDCWVVGRSEAEARQAAAELTGRPGTELTLERDPDVLDTWFSSALFPFSALGW
PQKTPDLAHFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKM
SKSLGNVLDPRDIISGVELQVLQAKLRDGNLDPAELAFAAAAQKKDFPHGIPECGTDALR
FALCSHGVLGGDLHLSVSEVLSCRHFCNKIWNALRFILNALGENFVPQPSEELSPTSPMD
AWILSRLALAARECERGFLTQELSLVTHTLHHFWLHNLCDVYLEAVKPVLLRKPRPPEPL
QVLFSCADVGLRLLAPLMPFLAEELWQRLPQRPGGFLAPSICVAPYPSAHSLEHWRHPEL
EQRFSQVQEAVQMLRALRATYQLTKARPQVLLQTLEPGEQGLFQAFLEPLGTLSHCGAVS
FLPPGAAAPSGWAQATLSDTVEVYMELQGLVDPQTQLPRLATRRLKLQKQLDGLMAWTPS
EGEAETQKQQRLSALQLELSKLDQAASHLQQLMDEAPSPREL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcccctggcctcgtttcggccaccattctgggggctgaggccctcacgg
ggcctccccaagccccgtcccctttccacacaatccgagccccatagctcctctgtctct
cggaggaaccgtgaagccaagcagaagcgcctgcgcgagaagcaggaggcgctggaagct
gccataacccggaaaagcaagtcacctgcagagaccagtaaggcatggagtcctaaggag
atagtattgtatgaaatcccaacagaacccggtgaaaagaaagatgtgtcagtacccttg
cctcctgcttacagcccccgatatgttgaggcttcttggtacccatggtgggttcgagag
ggcttcttcaaaccagaatatcagacgaggctgccccaggctacaggagagaccttctcc
atgtgtatcccacctccgaatgtcactggctctctacacattggccatgcactgacagtg
gctatccaggatgcccttgtgcgctggcatcggatgcgtggggatcgggtactgtgggtc
cctggctcagatcatgcaggaattgctacacaagctgtggtggagaaacaactgtggaag
gagcagggagtgaggaggcatgaactgggccgggaggacttccttaaggaggtgtggcag
tggaaggaggagaaaggaggagagatctgtgagcagttacgtgctctgggggcctccctg
gactgggatcgggagtgttttaccatggatgctggttcttcagtggctgtgactgaagct
ttcgtgcgactctacaatgcagggttgttgtacaggaactgtcagcttgtcaactggtca
tgtgctttaagatcagccatctcagatattgaggtggagaaccggcctctgcctggacgc
acagaactccggctgcctggctgtcccacccctgtgtcttttggcttccttgtttctgtt
gccttccctgtggatggagagcctgatgcagaggtagtggtgggaaccacaaggccagaa
acattgcctggagatgtggctgtagctgttcaccctgatgactcccgttacacacatcta
catgggcgacagctccgtcaccctctgacagggcagcttctccccctcatcacagaccct
gctgttcagccgcaggtgggcacaggagcagtgaaaatcactccagctcacagtcctgct
gacgctgagatgggggcccggcatggcttgagccccctgactgtcattgcggaggatggg
accatgacctcactctgtggggactggctgcagggtcttcaccgatttgtggcccgggag
aagattatgtgtgcactgagggagcggggccagttccggggcctccaggaccaccccatg
gtactgcccatatgcagccgttctggggatgtggtggaatacctactgaagagccagtgg
tttgttcgctgccaggaaatgggggaccgagctgcccaggctgtggagtcgggggctttg
gagctctgtccatctttccaccagaagagctggcagcactggttcgctcacattggggac
tggtgtgtctcccggcagctgtggtggggccatcggattccagcctaccttgtcactgag
gggcatgagaagcaggatgacaaggactgctgggtggtggggcggtctgaggcagaggcc
agacaggcagcagcagaactgactgggagaccaggaacagagctgaccctggagagggac
cccgatgtcctggatacttggttctcttctgctctctttcccttttctgccctgggctgg
ccccaaaagactccagaccttgcgcatttctaccccctgtcacttttggaaacgggcagt
gaccttctgctgttctgggtgggccgaatggtcatgctggggacccagctcacggggcag
ctccccttcagcaaggtgcttcttcattccatggttcgggacaggcagggccggaagatg
agcaagtctttggggaatgtgctggatccacgggacatcatcagtggtgtggagctgcag
gtgctgcaggccaagctaagagatgggaacctggaccccgcagagctggcctttgcagct
gcagcacagaaaaaggactttcctcatgggatacctgaatgtgggacagatgccctgaga
ttcgcactgtgctctcatggagtcctggggggcgacctgcacctgtctgtctctgaggtc
ctgagctgccgccatttctgcaacaagatctggaatgccctgcgttttattctcaatgcc
ctaggggagaattttgtaccccaaccttcagaggagctgtctcccacctcccccatggat
gcctggatcctgagccgcctggcccttgctgcccgtgagtgtgagcgtggcttcctcacc
caggagctctccctggtcacccataccctgcatcacttctggctccacaacctctgtgat
gtctacctggaagctgtgaagccagtgctgttgcgcaagccccgcccccctgagccactt
caggtcctattctcctgcgcagatgttggtctccgcctcctggccccactgatgcccttc
ctggctgaagagctctggcagaggctgccccaaaggccaggtggcttcttggctcccagc
atctgtgttgcaccctaccctagtgcccacagcttggagcactggcgccatcctgagttg
gagcagcgcttctcccaggtccaggaagccgtgcagatgcttcgagctcttcgagccacc
taccaactcaccaaagcccggccccaagtactgctgcagaccttggagccaggggagcag
ggcctcttccaggccttcctggagcccctgggcaccctgagccactgtggagctgtgagc
ttcctgcccccaggtgcagcagctccctcaggctgggcgcaggccaccctcagtgacact
gttgaggtctacatggagttgcagggcctggtagacccccagactcagctgcctcggcta
gccacccgaagactcaagttgcagaagcagcttgatggcctcatggcttggaccccatcc
gaaggggaggcagagacacagaagcagcaaaggctttccgctctccagctggaattgtca
aaactggaccaggcggcctctcacctccagcagctgatggatgaggctcccagccccagg
gagctttga
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integrated database retrieval system
