Dipodomys spectabilis (banner-tailed kangaroo rat): 122111309
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Entry
122111309 CDS
T07891
Symbol
Gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03022
Basal transcription factors
dsp03420
Nucleotide excision repair
dsp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122111309 (Gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
122111309 (Gtf2h4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122111309 (Gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122111309 (Gtf2h4)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122111309 (Gtf2h4)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122111309 (Gtf2h4)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122111309 (Gtf2h4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122111309
NCBI-ProteinID:
XP_042539998
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MENTPARGGLNRVHLQCKNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSSEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAAG
GTVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASG
ITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDF
ELLLAHAKELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacccctgcaaggggtggactgaaccgggtgcacctacaatgcaagaatcta
caggaattcttagggggcctgagtcctggagtattggatcgattgtatgggcaccctgcc
acttgtctggctgtgtttagggagctcccgtctctggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccgcaagctgccgtagccctgtgggtgaagaaggaattc
agcaaggctcaggaggaaagtacagggctgctgagtggcctccgtatctggcatacccag
ctgctccctggtggcctccagggcctcatcctgaacccaatcttccgccagaacctccga
attgcccttctgggtggggggaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgctcgggatgttccctcacttgacaagtacgccgaggagcgatgggaggtggtc
ttgcacttcatggtgggctcccccagtgcagctgtcagccaggacctggctcagctcctc
agccaggctgggctcatgaagagtagtgaacctggagagccaccctgtattacttctgct
ggcttccagttcctgttgctggatacccctgcccagctctggtactttatgcttcagtat
ctgcagacagcccagagccggggcatggatctggtggagattctgtctttcctcttccag
ctcagcttctctactctaggcaaggattactctgtggaaggtatgagtgattctttgttg
aacttcctgcagcatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcgg
cgttactaccccacacgcctggccatcaacctttcatctggtgtctctggggctgctggg
ggtactgtgcatcagccaggcttcattgtcgtggaaaccaattaccggttgtatgcctac
acagaatcagagctgcagatcgccctcattgccctcttctctgagatgctctatcgcttc
cccaacatggtggtggcacaggtgacccgggagagtgtgcagcaggccattgccagtggc
atcacagcccagcagataatccatttcctaaggacaagggcccacccagtgatgctcaaa
cagaccccggtgctgccccccaccatcacagaccagattaggctatgggagttggaaagg
gacagactccggttcactgaaggcgtcctgtacaaccagttcctgtcgcaagtggacttc
gagctgctgctggcgcacgcgaaggagctgggcgtgctggtgttcgagaactcagccaag
cggctcatggtggtgaccccggccgggcacagcgacgtcaagcgcttctggaagcggcag
aagcacagctcctga
DBGET
integrated database retrieval system
