Dipodomys spectabilis (banner-tailed kangaroo rat): 122111368
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Entry
122111368 CDS
T07891
Symbol
Vars1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122111368 (Vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsp01007
]
122111368 (Vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsp03016
]
122111368 (Vars1)
Enzymes [BR:
dsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122111368 (Vars1)
Amino acid related enzymes [BR:
dsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122111368 (Vars1)
Transfer RNA biogenesis [BR:
dsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122111368 (Vars1)
Prokaryotic type
122111368 (Vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
tRNA-synt_1e
Jag_N
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
122111368
NCBI-ProteinID:
XP_042540104
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGPHPRICLQPPPTSRTPYPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRGPAQDPQAALGALGKALSPLEEWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVRQPEFRAVLGEVVLYSGSKSLSQQPGPEVPAPPKTAAQLKKEAKK
REKLEKFQQKQKNQQQQPPPGEQKKPKQEKKEKRELGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRPNVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGLNRHQLGREAFLQEVWKW
KEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSTAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVEGSDHNEEVVVATTRIE
TMLGDVAVAVHPNDPRYKHLKGKSLIHPFLSRSLPIVFDEFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAISIMDSRGALVNVPPPFLNMPRFEARKAVLAALKEQGLFRGVEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDW
CISRQLWWGHRIPAYFVTVDDPTVPPGEDPDGRYWVSGRSEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAREGQKADFPVGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSKPGGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWL
YELCDVYLECIKPVLNGADQAAAESARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRT
PQAPASLCITPYPEPAECSWKDTEAEASLELALSITRAVRSLRADYNLTRIRPDCFLEVA
DEATGAVASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDRCSIHLQLQGLVDPAR
ELSKLQAKRSEAQRQAQRLRERRTASGYSVKVPLEVQEADDAKLQQTEAELRKVDEAIAL
FQKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcatccagatgcgttccccagcctccgagccctcata
gcggctcgctatggggaggctggagagggcccgggctggggaggaccccaccctcgcatc
tgtctccagccaccccctaccagccggactccctatcccccacctcgcctgcctgccctg
gagcagggacccggtggcctctgggtgtggggagccacagctgtggctcagctcctgtgg
ccagcaggcctaggaggccctggaggtagccgggcagctgtccttgtccaacagtgggtc
agttatgcagatacggagctcataccagctgcttgtggggcaacactaccagctctggga
ctccgaggccctgctcaggacccccaggctgcattgggggccctgggtaaggccctgagc
cccttggaggagtggcttcgactgcacacctacctggctggagatgcccccactctggct
gacctagctgctgtgacagccttgctgctacctttccgatacgtcctggacccctctgcc
cgccggatctggggtaatgtgactcgctggtttatcacttgtgtccggcagccagagttc
cgagccgtgctgggagaagtggttctatactcagggtccaagtctctctctcaacagcca
ggtcctgaggtccctgcacccccaaagacagctgctcaactcaaaaaagaggcaaagaaa
cgggagaagctagagaaattccaacaaaagcagaagaaccaacagcagcagccaccccct
ggagagcagaagaaaccaaaacaagagaagaaggagaaacgggagcttggagtcattacc
tatgacctcccaaccccacctggggaaaagaaagatgtcagtggcaccatgccggactcc
tacagccctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttc
aagccggaatacgggcgtcctaatgtgtcagcaccaaatccccgaggggtcttcatgatg
tgcatcccaccccccaacgtgacaggctccctgcacctgggtcatgcgctcaccaacgcc
atccaggactccctgactcgatggcaccgcatgcgtggggagaccaccctgtggaaccca
ggctgtgaccatgcaggcattgccacccaagtagtggtggagaagaaactatggcgagag
cgggggctgaaccggcaccaactgggcagagaggcctttcttcaggaggtctggaagtgg
aaggaggagaagggcgaccggatttaccaccagctaaagaagcttggcagctccttggac
tgggatcgagcctgtttcaccatggacccaaaattgtcaacagctgtgactgaagccttt
gtccggcttcatgaagaaggtgtcatctaccgcagtacccgcctggttaattggtcctgc
acactcaactccgccatctctgacattgaggtcgataaaaaagagctgacgggccgaacc
ctactctcagtacctggttacaaggagaaagtggagtttggggtccttgtgtcctttgcc
tataaggtggaaggttcagaccacaacgaggaggtggtggtggcaacaactcggattgag
accatgctgggagacgtggctgtggctgtgcaccccaatgatcccaggtataagcatctg
aaggggaagagcttgatccacccgttcctgtctcggagcctccccattgttttcgatgag
tttgtggacatggagtttggcacaggtgctgtgaagatcacccctgcacatgaccagaat
gactatgaggtcgggcagcggcatgggctggaagccatcagcatcatggactcccgtggg
gccctcgtaaacgtgcccccacctttcctgaacatgcccaggtttgaggccaggaaggca
gtgctggcagccctgaaagagcagggactgtttcgtggcgttgaggacaaccccatggtg
gtgccgctttgcaaccgttccaaggatgtggtggagcctctgctaaggccgcagtggtac
gtgcgttgtggggagatggcccaggctgccagcgctgctgtgacccggggcgacctccgt
atcctgcctgaggcccatcaacggacatggcattcctggatggacaacatccgggactgg
tgcatctcccggcagctgtggtggggccatcgcattccagcctactttgttactgttgat
gatcccacagtgccccctggggaggaccctgatgggcgatactgggtgagtggacgcagt
gaggcagaggcgcgggagaaggcagccaaagagtttggagtatcccccgacaagatcagc
ctccagcaagatgaggatgtattggacacctggttctcttctggcctcttccccttctcc
atcttgggctggcccaatcagtccgaagacctcagtgtgttctacccagggacactgctg
gaaacaggtcatgatatcctcttcttctgggtggcccggatggtcatgctcggcctaaag
ctcactggcaggctgcctttcagagaggtctacctgcatgctatcgtgcgtgatgctcac
ggcaggaagatgagcaagtctctaggcaacgtcatcgaccccctggacgtcatccatgga
gtctccttgcagggccttcacgaccaattactgaatagcaacctggatcccagtgaggtg
gagaaagctagagaagggcagaaagccgacttcccggtagggattcctgagtgtggcact
gatgccctccgctttggactctgtgcctatacatctcaggggcgggacatcaacctggat
gtgaaccggattctgggttaccgccacttctgcaacaagctctggaacgccaccaagttt
gccctccgtggccttgggaagggttttgtgccctcacccacctccaagcctggaggccac
gagagcctggtggaccgctggatccgcagccggctgaccgaggctgtgcggcttagcaat
gaaggtttccaggcctatgatttcccagccatcaccactgctcagtacagtttttggctc
tatgagctatgcgacgtgtacttggagtgcataaagccagtactgaatggagcagaccag
gctgcagctgagagcgcccgccagaccctctacacctgtctggacgttggcctgcggctg
ctctcacccttcatgccctttgtgacggaggagctgttccagaggcttccccgacggaca
ccacaagctcccgctagcctttgcattaccccttatccagagcctgcagagtgctcctgg
aaggacactgaagcagaagcctcccttgaactcgcgctaagcatcactcgagctgtgcgc
tccctacgtgccgactacaacctgacccggatccggcccgactgtttcctggaagtggct
gatgaggccacaggtgctgtggcctccgcggtgtctggatatgtgcaggcgctggccagc
gcgggtgtggtggctgtcctggccttgggggcccctgcaccccagggctgcgccgtggct
ctggcctctgaccgctgctccatccacctgcagctgcagggactagtggatccagcccgg
gaactgagcaaactgcaggccaaacgaagtgaggcgcagaggcaggcccagcgtctgcgg
gagcgccgcaccgcctccggctactctgtcaaggttcccctcgaagtccaggaggcagat
gacgccaagctacaacagacagaggcagagctcaggaaggtggatgaggccattgcccta
ttccagaagatgctgtga
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integrated database retrieval system
