Dipodomys spectabilis (banner-tailed kangaroo rat): 122111774
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Entry
122111774 CDS
T07891
Symbol
Abcb1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp02010
ABC transporters
dsp04976
Bile secretion
dsp05206
MicroRNAs in cancer
dsp05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122111774 (Abcb1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
122111774 (Abcb1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122111774 (Abcb1)
09162 Cancer: specific types
05226 Gastric cancer
122111774 (Abcb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122111774 (Abcb1)
04147 Exosome [BR:
dsp04147
]
122111774 (Abcb1)
04090 CD molecules [BR:
dsp04090
]
122111774 (Abcb1)
Enzymes [BR:
dsp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122111774 (Abcb1)
Transporters [BR:
dsp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122111774 (Abcb1)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122111774 (Abcb1)
CD molecules [BR:
dsp04090
]
Proteins
122111774 (Abcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_22
Rad17
Zeta_toxin
AAA_5
AAA
AAA_14
G-alpha
AAA_29
AAA_7
APS_kinase
AAA_30
AAA_15
DUF815
nSTAND1
NTPase_1
nSTAND3
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122111774
NCBI-ProteinID:
XP_042540423
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MDSTKDSDGAGKNSELNKKSKKKEKKPTVSTFAMFRYAGWLDRLYMILGTLAAVIHGAAL
PIMMLVFGEMTDSFANAGSSLPNATQSNVYLNKTDILEKLEQDMTKYAYYYTGIGAGVLV
AAYIQVSFWCLAAGRQINKIRKEFFHAIMKQEIGWFDVHDVGELNTRLTDDVSKINEGIG
DKIGLFFQAMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAALWAKILSSFTDKELLAY
AKAGAVAEEVLAAIRTVIAFGGQSKELERYNKNLEDAKRIGIRKAITANISIGAAFLLIY
ASYALAFWYGTSLVLSSEYSIGQVLTVFFSVLIGAFSIGQATPNIEAFANARGAAYEVFK
IIDNKPSIDSFSTSGHKPDTIKGNLEFRNIHFSYPSRKEVKILKGLNLKVQSGQTVALVG
NSGCGKSTTVQLIQRLYDPTEGVVSIDGQDIRTINVKYLREIIGVVSQEPVLFATTIAEN
IRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVR
NPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVIAGFDDGVIV
EKGNHDELMREKGVYYKLVTMQTGGNEIELENDLYGPNGETHNVDMSSKDSRSSLLRRKS
SRRSIHSPQDEERKPSTKEEALDENVPPVSFWRILKLNLTEWPYFVVGIFCAVINGGLQP
AFSIIFSKIVGVFARDDDPETKRNNSNLFSLLFLILGIISFITFFLQGYTFGKAGEILTR
RLRYMVFRSMLRQDVSWFDNPKNTTGALTTRLANDAAQVKGATGSRLALITQNIANLGTG
IIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGHALKDKKELEGSGKIATEAIENFRT
VVSLTREQKFEQMYSQGLQVPYRNALKKAHIFGITFSFTQAMMYFSYAACFRFGAYLVAR
ELMVFEDVLLVFSAIVFGAMAVGQVSSLAPDYAKAKVSASHVIMLIEKVPEIDSYSTDGL
KPKVLEGNVTFNEVKFNYPTRPDIPVLQGLSLQVKKGQTLALVGSSGCGKSTVVQLLERF
YDPLAGTVLLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRTVSQDEII
RAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSAL
DTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEYGTHQQLLAQKGI
YFSMVSVQAGVKRQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggactccacaaaagacagcgatggagcagggaagaactcagagctcaacaaaaagagt
aagaagaaggaaaaaaaaccaactgtcagtacatttgcaatgtttcgctatgcaggttgg
ctcgacaggctgtatatgatcctgggaactttggctgctgttatccatggagctgcactc
ccgatcatgatgctggtatttggagaaatgacagatagctttgcaaatgcaggaagtagt
ttgccaaatgctactcaaagtaatgtctatctcaacaaaactgatatcctggaaaaattg
gaacaagacatgaccaagtatgcctattattacactggaattggtgctggcgtgcttgtt
gctgcatacattcaggtgtcattttggtgcttggcagctggaagacaaattaataaaatt
aggaaagagttttttcatgctataatgaaacaagagataggctggtttgatgttcatgac
gtgggagagcttaacacccggctcacagatgatgtctccaaaattaatgaaggaattggt
gacaagattggattgttctttcaagcaatggcaacatttttcactggttttatagtagga
tttacacgtggctggaagctaacccttgtgattttggccatcagccctgttcttggactg
tcagctgccctatgggcaaagatattatcttcatttactgacaaagagctcttggcatat
gcaaaagctggggcagtagctgaagaagtcttagcagccatcagaactgtgattgccttt
ggtggacaaagcaaagaacttgaaaggtacaataagaatctagaagacgcaaagagaatt
gggataaggaaagctatcacagccaacatttccatcggtgctgctttcctactgatctat
gcatcgtatgctctggctttctggtatgggacctccttggtcctctccagtgaatattct
attggacaagtgctcactgtcttcttttctgtattaattggagcatttagtattggacag
gcaactccgaacattgaagcatttgcaaatgccagaggtgcagcttatgaagtcttcaag
atcattgataataagccaagcatcgacagcttctcaacaagtggacacaaaccagatact
atcaagggaaatttggaattcagaaatattcatttcagttacccatctcgaaaggaagtt
aagatcttgaagggactcaacctgaaggtgcagagtggacagacagtggccctggttggg
aacagtggctgtgggaagagcacgacagtgcagctgatccagaggctctatgatcccaca
gagggcgtggtcagtattgatggacaggacattaggaccataaacgtgaaatatctgcgg
gagatcattggtgtggtgagtcaggaacccgtgttgtttgccaccacaatagcagaaaac
attcgctatggtcgtgaaaatgtcaccatggatgagattgagaaagctgtaaaggaagcc
aatgcctatgacttcatcatgaaactgccccataaatttgacaccctggttggagagaga
ggggcccagctgagtggtggacagaagcagagaatcgccatagcacgtgccctggttcgc
aaccctaagatcctcctgctggacgaggccacatcggccttggacacagaaagtgaagct
gtggttcaggtggctctggataaggccagagaagggcggaccaccattgtgatagctcat
cgcttgtctacagttcgtaatgctgatgtcattgctggttttgatgatggagtcattgtg
gagaaaggaaatcacgatgaactcatgagagagaaaggagtttactacaaacttgtcaca
atgcagacaggaggaaatgaaattgaattagaaaatgacctttatggacctaatggtgaa
actcataacgttgatatgtcctcaaaagactcacgatccagtctattaagaagaaaatca
agtcgcagaagtatccacagtccacaagacgaagaaagaaagcctagtacaaaagaggag
gccttggatgaaaatgtacctccagtttctttctggaggattctaaaactgaatttaact
gagtggccatattttgtggttggtattttttgtgctgttataaatgggggcctacaacca
gcattttcaataatattttcaaagattgtaggggttttcgcaagagatgatgatcctgaa
acaaaacggaacaatagtaacctgttttcacttttatttctcatccttggaattatatca
tttattacatttttccttcagggctacacatttggtaaagctggagaaatcctcaccaga
cggctacggtacatggttttcagatccatgctgagacaggatgtaagctggtttgataac
ccaaaaaataccactggagctttgaccaccaggcttgccaatgatgctgcacaagtaaaa
ggggctacaggttccagacttgctttaattactcagaatatcgcaaatcttggaacagga
atcattatatccttaatctatggctggcaattgacacttttgctcctggcaattgtgccc
atcattgcgatcgcaggagttgttgaaatgaaaatgttgtctggacatgcactaaaagat
aagaaagagctagaaggctctggaaagattgccactgaagcaatagaaaacttcagaact
gtggtttctttgactcgggagcagaagtttgaacagatgtattcccagggtttgcaggta
ccatacagaaatgctttgaagaaagcacacatctttggaatcacgttctccttcactcag
gcaatgatgtacttttcctatgctgcctgtttccggtttggtgcctacttggtggcccgt
gagctgatggtatttgaagatgttctattggtcttttcagctattgtctttggcgccatg
gcagttggacaggtcagttcacttgctcctgactatgccaaagccaaagtgtcagcatct
catgtcatcatgctcattgaaaaagtcccggagattgacagctacagcacagacggatta
aagccaaaggtgttggaaggaaatgtgacctttaatgaagtgaagttcaactatcccacc
cggccagacatcccagtgcttcagggactgagtctgcaggtgaagaaaggccagacgctg
gctctggtgggcagcagcggctgtgggaagagcacggtggtgcagctcctggagcgcttc
tatgacccattggccggcacagtgcttctggatggcaaggaaataaagcaactgaacgtg
cagtggctccgagcacacctgggcattgtgtcacaggagcccatcctgtttgactgcagc
attgctgagaacatcgcctatggagacaacagccggactgtgtcccaggatgagatcatc
agggcggccaaggaggccaacatacaccagttcattgactcgctgcctgataaatacaac
accagagttggagataaaggaactcagctatctggtggtcagaaacagcgcattgccata
gctcgtgccctggttaggcagcctcatattttgcttttggatgaagctacatcagctcta
gatacagaaagtgaaaaggttgtgcaagaagccctggacaaagccagagaaggccgcacg
tgcattgtgatcgctcaccgcctgtccaccatccagaacgcagatctaattgtggtgatc
cagaatggcaaagtcaaggagtatggcacccaccaacagctgctggcacagaaaggcatc
tatttttccatggtcagtgtccaggctggagtgaagcgccagtga
DBGET
integrated database retrieval system
