Dipodomys spectabilis (banner-tailed kangaroo rat): 122111778
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Entry
122111778 CDS
T07891
Symbol
Vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122111778 (Vps50)
Membrane trafficking [BR:
dsp04131
]
Protein recycling
Others
EARP complex
122111778 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
122111778
NCBI-ProteinID:
XP_042540427
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPILNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDATTASEG
SNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSSSSKAATLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNMYVDALLKEFEQFNRRLNDVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctcttatgacccggcagggtttaaaaagccccccagagagcctc
agtgatcttggtgccattgagagtctgcgcgtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctgcagactcatttgatattgttaaatatgagctggagaaacttccacctatt
ctcaatttgcaagaattagaggagtaccgagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgagaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggactacagttagctgctgttatctgcacaaatgggagg
agacatttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaagtctctgagaactataaaaacattg
caaagaacagatgtacgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaggctgccagcacttttaaacattacagttgtataagt
gagttgaattcaaagctgcaagacactttggaacaaattgaggaacaattagatgttgca
ctttcaaaaatctgcaagaattttgatattaatcattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcactttactcaagcc
attcacaataccgtatttcaagttgtccttggttatgtggaactatgtgcaggaaacacg
gacacaaaattccaaaagctgcaatataaagacctctgtacgcatgttacaccagacagc
tacattccctgcctggcagacctgtgtaaagcactgtgggaagttatgctcagctactac
aggaccatggagtggcacgaaaagcatgacaatgaggatgcaactacagcttctgaaggg
agtaatatgatgggtactgaagaaactaattttgatcgtggctacataaaaaagaagtta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatacgatgatttcatctttgttttggatataataagc
aggttgatgcaggttggagaagaattttgtggtagcaaatctgaagttttacaagagtct
attagaaaacagagtgtcaattatttcaagaactatcatagaacacgacttgatgaactc
agaatgttcttagagaatgagacttgggagctttgtcctgtgaagtcaaatttcagcatc
ttgcagcttcatgaatttaaattcatggaacaatcccgatccccatcagtttcacctagt
aagcagccagtgtcaagttcttcaaaagcagcaactctgtttgagcagtactgtagtggt
gggaatccatttgaaattcaagccaaccacaaagatgaagaaacagaagatgtcttggct
tctaatggatacgagtctgatgaacaagaaaagagtgcctatcaagagtatgacagtgac
agtgatgttcctgaggaactcaagcgagattatgtggatgagcagacaggtgatgctcca
gtaaaaagtgtttctcgagaaaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgctcctatcttaacaaatacaacactaaatgtgataagacttgttgggaaa
tatatgcaaatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctctttgattattacttatatgcaatatataccttttttgggcggaatgattcatta
gaatcaacaggactcggtcttagcagtagtcgattaagaacaactctgaacaggatacaa
gagagccttattgacctggaagtctcagctgatcccactgccacactcacagcagcagaa
gaaagaaaggagaaggtgcccagcccacaccttagtcatctagtggttttgacatctggg
gatacattgtatggattagcagagagagtggtagccacagaatccttggtgttcttggct
gaacagtttgagttccttcagccacatttggatgctgtgatgcctgcagtcaaaaagccc
tttctgcagcagttctactctcagacagtctcaactgccagtgaactgcgcaaaccaatt
tactggattgtagctgggaaagccattgattatgaacagatgctactcctaatggccaat
gtgaagtgggatgtaaaggaaattatgtcacagcacaacatgtatgtagatgcattgtta
aaggaatttgagcagtttaacaggaggttaaatgacgtttcaaagagagttcggataccc
ttgcctgtgtctaatatactatgggaacattgtatacgactggctaatagaactattgtg
gaagggtatgccaacgtcaaaaagtgcagtaatgaaggacgggccttaatgcagttggat
ttccaacagtttttaatgaaacttgaaaaactgactgatattagacccattcctgataaa
gaatttgtggaaacctacatcaaggcttactacctaactgagaatgacatggaacgctgg
atcaaagagcatagggaatattcaacgaagcagttgaccaatctggtgaacgtttgcttg
ggatcccatatcaacaagaaagcaagacaaaaacttctggcagctatagatgatatagac
agacctaaaagataa
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